Factsheet for HORVU5Hr1G076210.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G293300.1	Wheat	plasma membrane	88.89	87.0
TraesCS5A01G286000.1	Wheat	plasma membrane	82.93	85.71
HORVU5Hr1G076120.2	Barley	golgi, plasma membrane, vacuole	41.19	56.3
PGSC0003DMT400017300	Potato	plasma membrane	14.36	53.54
HORVU3Hr1G094000.3	Barley	plasma membrane	49.05	47.26
Solyc01g068410.2.1	Tomato	extracellular, plasma membrane	45.8	47.21
PGSC0003DMT400046253	Potato	plasma membrane	45.26	47.04
VIT_04s0023g00450.t01	Wine grape	golgi, plasma membrane	42.55	43.49
PGSC0003DMT400017301	Potato	golgi, plasma membrane	18.97	39.55
Solyc04g056620.1.1	Tomato	plasma membrane	35.77	38.04
HORVU3Hr1G067670.3	Barley	plasma membrane	36.59	37.82
PGSC0003DMT400027309	Potato	extracellular, plasma membrane, vacuole	31.98	36.76
HORVU3Hr1G078620.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	35.5	30.47
HORVU3Hr1G057630.3	Barley	plasma membrane	43.63	26.92
HORVU1Hr1G072970.9	Barley	golgi, plasma membrane, vacuole	42.55	26.84
HORVU1Hr1G091030.2	Barley	golgi, plasma membrane, vacuole	43.09	26.19
HORVU7Hr1G110470.7	Barley	golgi, plasma membrane, vacuole	43.9	25.55
HORVU6Hr1G076110.2	Barley	plasma membrane	37.94	23.29
HORVU5Hr1G076060.2	Barley	mitochondrion	22.76	23.08
HORVU4Hr1G026680.4	Barley	plastid	44.17	20.87
HORVU3Hr1G111420.1	Barley	mitochondrion, plastid	18.43	15.81
HORVU7Hr1G038700.9	Barley	nucleus, plastid	22.49	11.94

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	UniProt:A0A287RUW7	InterPro:Auxin_eff_plant	GO:GO:0005575	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:HORVU5Hr1G076210	EnsemblPlants:HORVU5Hr1G076210.1	InterPro:Mem_trans
PFAM:PF03547	PANTHER:PTHR31752	PANTHER:PTHR31752:SF15	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI000B46D87B
SEG:seg	:	:	:	:	:

Description

Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A287RUW7]

Coordinates

chrchr5H:-:549666817..549669485

Molecular Weight (calculated)

39706.8 Da

IEP (calculated)

7.927

GRAVY (calculated)

0.643

Length

369 amino acids

Sequence
(BLAST)

001: MIGWGDVYRV AAAMAPLYFA LGLGYGSVRW WKLFTADHCD AVNRLVVYFA FPLYGFDFTA RAGSFAAGYR VLAADVLAKL AVVLALSGWA AARRGEASSY
101: SWCITGFSLA ALNNGLLVGV PLLDAMYGKW ARDIMVQLSV LQGVVWFPLM LVVFEARQAW LEVTSDSESP EIAREQDDQE APGTDDADRP AVAEDGRKTA
201: ATGCAFWAPL LRAVGVKLAR NPNVYASLLG VAWSSVANRW HLKMPSIIDG SISIMSKTGI GMGMFSMGMF IGLQDKFIVC GFGLTLLSLV LRFIVAPTVT
301: IVGALILGLR GDLLRVTILQ AALPQSVATF VFSREYNLHA GVLSTAVIVS TLASLPVLTA YYLVLGLVI

Best Arabidopsis Sequence Match ( AT5G16530.2 )
(BLAST)

001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTA

Arabidopsis Description

PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.