Factsheet for TraesCS5A01G286000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G293300.1	Wheat	plasma membrane	96.64	91.51
HORVU5Hr1G076210.1	Barley	plasma membrane	85.71	82.93
TraesCS5A01G285700.1	Wheat	golgi, plasma membrane, vacuole	75.63	69.77
TraesCS5A01G284500.1	Wheat	extracellular, plasma membrane, vacuole	61.34	60.0
TraesCS7A01G258800.1	Wheat	plasma membrane, vacuole	54.34	52.86
TraesCS3A01G426700.1	Wheat	plasma membrane	48.46	45.89
PGSC0003DMT400046253	Potato	plasma membrane	44.26	44.51
Solyc01g068410.2.1	Tomato	extracellular, plasma membrane	44.54	44.41
PGSC0003DMT400017300	Potato	plasma membrane	11.76	42.42
PGSC0003DMT400017301	Potato	golgi, plasma membrane	20.45	41.24
VIT_04s0023g00450.t01	Wine grape	golgi, plasma membrane	40.9	40.44
PGSC0003DMT400027309	Potato	extracellular, plasma membrane, vacuole	33.05	36.76
TraesCS3A01G243700.1	Wheat	plasma membrane	36.41	36.41
Solyc04g056620.1.1	Tomato	plasma membrane	34.45	35.45
TraesCS3A01G331300.1	Wheat	plasma membrane	33.89	28.01
TraesCS4A01G188100.1	Wheat	plasma membrane	42.3	26.58
TraesCS3A01G231500.1	Wheat	plasma membrane	42.58	25.55
TraesCS7A01G190600.1	Wheat	plasma membrane	41.46	25.21
TraesCS6A01G308600.1	Wheat	plasma membrane	40.9	24.83
TraesCS1A01G415400.1	Wheat	golgi, plasma membrane, vacuole	40.34	24.04
TraesCS7A01G492400.1	Wheat	golgi, plasma membrane, vacuole	42.3	23.89

Protein Annotations

EnsemblPlants:TraesCS5A01G286000.1	EnsemblPlantsGene:TraesCS5A01G286000	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF15	PFAM:PF03547
SEG:seg	TMHMM:TMhelix	MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	:	:

Description

No Description!

Coordinates

chr5A:-:493815278..493818318

Molecular Weight (calculated)

37931.7 Da

IEP (calculated)

9.391

GRAVY (calculated)

0.613

Length

357 amino acids

Sequence
(BLAST)

001: MIGWGDVYRV AAAMAPLYFA LGLGYGSVRW WKLFTPDHCD AVNRLVVYFA FPLFGFDFTA RAGSFAAGYR VLAADAVAKL IVVLALAGCA AARRAKAATR
101: RGGGSAPSSY SWCITGFSLA ALNNGLLVGV PLLDAMYGKW ARDVIVQLSV LQAVVWLPLM LVVFEARQAW LEVTPEPADQ GAVAREEGDL QEAPGSDVHR
201: PAAAGDGRKM AATGCAFWAP LLRAVGVKLA RNPNVYASLL GVAWSFVANR WHLKMPSIID GSIAIMSKTC IGMGMFSMGM FIGLQDKFIV CGLGLTALSL
301: VLRFIVAPAA TVAGALILGL RGDLLRVTIL QAALPQSVAT FVFSREYDLH AGVLSTA

Best Arabidopsis Sequence Match ( AT5G15100.1 )
(BLAST)

001: MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL

Arabidopsis Description

PIN8Auxin efflux carrier component 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.