Factsheet for TraesCS5A01G284500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G283500.1	Wheat	extracellular, plasma membrane, vacuole	98.9	98.1
TraesCS5D01G291800.1	Wheat	extracellular, plasma membrane, vacuole	97.53	97.0
Zm00001d006082_P001	Maize	extracellular, plasma membrane, vacuole	79.73	79.73
KXG35972	Sorghum	extracellular, plasma membrane, vacuole	80.0	78.71
PGSC0003DMT400017300	Potato	plasma membrane	18.63	68.69
TraesCS7A01G258800.1	Wheat	plasma membrane, vacuole	64.66	64.31
TraesCS5A01G286000.1	Wheat	plasma membrane	60.0	61.34
TraesCS5A01G285700.1	Wheat	golgi, plasma membrane, vacuole	64.93	61.24
TraesCS3A01G426700.1	Wheat	plasma membrane	58.36	56.5
PGSC0003DMT400046253	Potato	plasma membrane	53.7	55.21
Solyc01g068410.2.1	Tomato	extracellular, plasma membrane	52.6	53.63
PGSC0003DMT400017301	Potato	golgi, plasma membrane	23.84	49.15
HORVU5Hr1G076120.2	Barley	golgi, plasma membrane, vacuole	35.89	48.52
VIT_04s0023g00450.t01	Wine grape	golgi, plasma membrane	47.95	48.48
Solyc04g056620.1.1	Tomato	plasma membrane	38.08	40.06
TraesCS3A01G243700.1	Wheat	plasma membrane	39.18	40.06
PGSC0003DMT400027309	Potato	extracellular, plasma membrane, vacuole	33.42	38.01
TraesCS4A01G188100.1	Wheat	plasma membrane	49.04	31.51
TraesCS3A01G331300.1	Wheat	plasma membrane	37.26	31.48
TraesCS3A01G231500.1	Wheat	plasma membrane	49.32	30.25
Os09t0505400-00	Rice	mitochondrion, nucleus, peroxisome	34.25	30.19
TraesCS7A01G190600.1	Wheat	plasma membrane	47.4	29.47
TraesCS6A01G308600.1	Wheat	plasma membrane	47.12	29.25
TraesCS1A01G415400.1	Wheat	golgi, plasma membrane, vacuole	46.3	28.21
TraesCS7A01G492400.1	Wheat	golgi, plasma membrane, vacuole	48.77	28.16

Protein Annotations

EnsemblPlants:TraesCS5A01G284500.1	EnsemblPlantsGene:TraesCS5A01G284500	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Auxin_eff_plant	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF15
PFAM:PF03547	SEG:seg	TIGRFAMs:TIGR00946	TMHMM:TMhelix	MapMan:11.2.4.1.1	MapMan:24.2.5.2.1

Description

No Description!

Coordinates

chr5A:-:492633324..492637155

Molecular Weight (calculated)

38678.7 Da

IEP (calculated)

8.814

GRAVY (calculated)

0.722

Length

365 amino acids

Sequence
(BLAST)

001: MIGWGDVYKV VAAMAPLYFA LGLGYGSVRW WKLFTPDQCD AVNRLVAYFA VPFFAFDFAA RMDPYALNYR VLAADALSKL AVALALAAWA AASTRCCRAG
101: AKRGGELASS WCITGFSLAT LNNTLVVGVP LLDAMYGGWA RDLVVQISVV QIIVYFPLLL LAFEARRACG GGAGKPDAAV AVSASDDDVE DGGAEGRRRR
201: EPVWPLVRAV WLKVARNPNV YAGVLGVAWS CVTNRWHIVT PSIIEGSVLI MSRTGVGLAM FSMGLFMALQ EKIIVCGAGL TALGMALRFV AGPAATAAGA
301: VALGLRGDVL RLAIIQAALP QSITTFVFAK EYGLHADVLS TAVIFGTLAS LPVLIVYYIV LGFVG

Best Arabidopsis Sequence Match ( AT5G16530.1 )
(BLAST)

001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H

Arabidopsis Description

PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.