Factsheet for TraesCS5B01G283600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G283500.1	Wheat	extracellular, plasma membrane, vacuole	87.91	86.96
Zm00001d006082_P001	Maize	extracellular, plasma membrane, vacuole	75.55	75.34
KXG35972	Sorghum	extracellular, plasma membrane, vacuole	73.35	71.97
PGSC0003DMT400017300	Potato	plasma membrane	17.86	65.66
TraesCS5B01G285000.1	Wheat	plasma membrane	61.26	57.62
TraesCS5B01G284900.1	Wheat	golgi, plasma membrane, vacuole	59.62	57.56
TraesCS3B01G462900.1	Wheat	plasma membrane	56.04	55.43
PGSC0003DMT400046253	Potato	plasma membrane	51.37	52.68
Solyc01g068410.2.1	Tomato	extracellular, plasma membrane	51.1	51.96
VIT_04s0023g00450.t01	Wine grape	golgi, plasma membrane	47.25	47.65
PGSC0003DMT400017301	Potato	golgi, plasma membrane	23.08	47.46
HORVU5Hr1G076120.2	Barley	golgi, plasma membrane, vacuole	34.89	47.04
Solyc04g056620.1.1	Tomato	plasma membrane	37.36	39.19
TraesCS3B01G276500.1	Wheat	plasma membrane	37.91	38.66
PGSC0003DMT400027309	Potato	extracellular, plasma membrane, vacuole	33.24	37.69
TraesCS7B01G359300.1	Wheat	plasma membrane, vacuole	38.46	35.09
TraesCS7B01G331500.1	Wheat	cytosol, plasma membrane, vacuole	37.64	33.74
TraesCS3B01G361500.1	Wheat	plasma membrane	38.46	32.71
TraesCS7B01G359200.1	Wheat	plasma membrane	35.16	32.57
TraesCS4B01G130100.1	Wheat	plasma membrane	48.08	30.92
TraesCS7B01G095500.1	Wheat	plasma membrane	45.88	28.5
TraesCS1B01G445400.1	Wheat	golgi, plasma membrane, vacuole	44.51	27.14
Os09t0505400-00	Rice	mitochondrion, nucleus, peroxisome	30.49	26.81
TraesCS7B01G398100.1	Wheat	golgi, plasma membrane, vacuole	46.15	26.58
TraesCS3B01G260700.1	Wheat	plasma membrane	40.66	24.3
TraesCS6B01G337300.3	Wheat	plasma membrane	32.42	19.83

Protein Annotations

EnsemblPlants:TraesCS5B01G283600.1	EnsemblPlantsGene:TraesCS5B01G283600	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Auxin_eff_plant	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF15
PFAM:PF03547	SEG:seg	TIGRFAMs:TIGR00946	TMHMM:TMhelix	MapMan:11.2.4.1.1	MapMan:24.2.5.2.1

Description

No Description!

Coordinates

chr5B:-:469292007..469300602

Molecular Weight (calculated)

38968.9 Da

IEP (calculated)

8.035

GRAVY (calculated)

0.628

Length

364 amino acids

Sequence
(BLAST)

001: MIRWGDVYKV VAAMAPIYFA LGLGYGSVRW WKLFTPDQCD AVNRLVAYFA VPFFALDFAA RMDPYALNYR VLAADALSKL AVALALAAWA AASTHCCRGG
101: GKRGGELASS WCITGFSLAT LTNTLVVGVP LLDAMYGGWA RDLVVQISVV QIIVYFPLLL LAFEARRAWG GGPGKPGAEA ALASDGDVED GGAEDSRQRQ
201: PVWPLVRAVW LKVARNPNVY AGMLGVAWSC ITNRWHIETP SIIEGSVLIM SRTGLGLCMF SMGQFMALQE RVVACGAQLT AVGMALRFLV GPAATAAGAV
301: ALGLHGDVLR VTIIQAALPQ AITTFVFARE YGLHADVLST AVIFGTLMSL PVLIVYYIAL PFIE

Best Arabidopsis Sequence Match ( AT5G15100.1 )
(BLAST)

001: MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL

Arabidopsis Description

PIN8Auxin efflux carrier component 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.