Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G23080.1 | CDX73342 | AT1G35670.1 | 19130088 |
| AT1G23080.1 | CDY37101 | AT1G35670.1 | 19130088 |
| AT1G23080.1 | CDX90725 | AT4G09570.1 | 19130088 |
| AT1G23080.1 | CDY05064 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12491 | Canola | plasma membrane | 97.91 | 97.74 |
| Bra012358.1-P | Field mustard | golgi, plasma membrane | 99.65 | 94.69 |
| AT1G23080.1 | Thale cress | plasma membrane | 91.8 | 84.98 |
| CDX68327 | Canola | plasma membrane | 71.03 | 83.92 |
| CDX91695 | Canola | plasma membrane | 83.25 | 83.54 |
| CDX96288 | Canola | golgi, plasma membrane | 84.99 | 83.53 |
| CDY68262 | Canola | plasma membrane | 84.99 | 83.39 |
| CDY23471 | Canola | golgi, plasma membrane | 71.38 | 82.96 |
| CDY41467 | Canola | plasma membrane | 84.29 | 82.71 |
| CDY40380 | Canola | plasma membrane | 80.28 | 81.85 |
| CDY63826 | Canola | plasma membrane | 79.76 | 81.17 |
| Solyc05g008060.2.1 | Tomato | nucleus | 82.55 | 72.43 |
| PGSC0003DMT400078330 | Potato | golgi, plasma membrane | 82.55 | 72.32 |
| Solyc04g007690.2.1 | Tomato | plasma membrane | 76.79 | 71.78 |
| VIT_01s0011g04860.t01 | Wine grape | golgi, plasma membrane | 81.15 | 71.65 |
| KRH38202 | Soybean | plasma membrane | 78.71 | 71.14 |
| KRH50369 | Soybean | plasma membrane | 81.5 | 70.23 |
| CDY09501 | Canola | plasma membrane | 68.94 | 70.04 |
| KRG89296 | Soybean | plasma membrane | 81.15 | 69.82 |
| KRH49577 | Soybean | plasma membrane | 66.49 | 68.53 |
| GSMUA_Achr8P29780_001 | Banana | golgi, plasma membrane, vacuole | 56.37 | 66.74 |
| CDX82059 | Canola | golgi, plasma membrane | 60.73 | 66.16 |
| CDX96484 | Canola | plasma membrane | 61.43 | 65.79 |
| PGSC0003DMT400015267 | Potato | cytosol | 52.71 | 65.09 |
| GSMUA_Achr7P17140_001 | Banana | plasma membrane | 65.79 | 64.78 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 68.59 | 64.74 |
| TraesCS3D01G221900.1 | Wheat | plasma membrane | 66.49 | 64.58 |
| TraesCS3A01G231500.1 | Wheat | plasma membrane | 66.67 | 64.2 |
| Os01t0643300-01 | Rice | golgi, plasma membrane, vacuole | 68.76 | 63.75 |
| CDY47745 | Canola | golgi, plasma membrane | 63.7 | 63.59 |
| Zm00001d044083_P001 | Maize | plasma membrane | 67.36 | 63.28 |
| EES01159 | Sorghum | golgi, plasma membrane | 66.84 | 58.65 |
| CDY38263 | Canola | plasma membrane | 58.81 | 58.3 |
| CDY11886 | Canola | plasma membrane | 62.13 | 57.51 |
| Zm00001d045219_P001 | Maize | plasma membrane | 57.07 | 56.28 |
| CDY20694 | Canola | plasma membrane | 61.95 | 55.91 |
| TraesCS1D01G422900.1 | Wheat | golgi, plasma membrane, vacuole | 58.12 | 55.87 |
| EER89254 | Sorghum | golgi, plasma membrane, vacuole | 58.46 | 55.83 |
| TraesCS1B01G445400.1 | Wheat | golgi, plasma membrane, vacuole | 58.12 | 55.78 |
| CDY53978 | Canola | plasma membrane | 57.94 | 55.7 |
| TraesCS3B01G260700.1 | Wheat | plasma membrane | 58.99 | 55.5 |
| CDY72296 | Canola | golgi, plasma membrane | 43.63 | 55.19 |
| Os05t0576900-01 | Rice | golgi, plasma membrane, vacuole | 56.89 | 55.16 |
| CDX88606 | Canola | plasma membrane | 61.78 | 55.05 |
| CDY69709 | Canola | plasma membrane | 58.12 | 54.95 |
| TraesCS1A01G415400.1 | Wheat | golgi, plasma membrane, vacuole | 57.24 | 54.76 |
| CDY63766 | Canola | golgi, plasma membrane | 25.83 | 49.83 |
| CDX85565 | Canola | plasma membrane | 31.24 | 49.45 |
| CDX69445 | Canola | golgi, plasma membrane, vacuole | 29.67 | 48.85 |
| CDY67254 | Canola | golgi, plasma membrane, vacuole | 29.67 | 48.85 |
| CDX87543 | Canola | plasma membrane | 48.17 | 48.68 |
| CDX88341 | Canola | plasma membrane | 48.17 | 48.68 |
| CDX70699 | Canola | golgi, plasma membrane, vacuole | 29.49 | 48.56 |
| CDX69551 | Canola | endoplasmic reticulum, extracellular, vacuole | 18.67 | 47.77 |
| CDX78697 | Canola | plasma membrane | 29.49 | 42.89 |
| CDY66594 | Canola | plasma membrane | 32.46 | 41.43 |
| HORVU7Hr1G038700.9 | Barley | nucleus, plastid | 26.18 | 21.58 |
| CDX85566 | Canola | cytosol | 2.97 | 6.16 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | GO:A0A078GKS8 | UniProt:A0A078GKS8 | InterPro:Auxin_eff_plant | EnsemblPlants:CDY25767 |
| ProteinID:CDY25767 | ProteinID:CDY25767.1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00033160001 | InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF36 |
| TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI0004EEC1B8 | SEG:seg | : | : |
Description
BnaA07g10150DAuxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A078GKS8]
Coordinates
chrLK032180:-:197716..200602
Molecular Weight (calculated)
62296.0 Da
IEP (calculated)
7.655
GRAVY (calculated)
0.259
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNLR FIAADTLQKL IMLSLLTLWA NFTRAGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQVVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEVGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YSVMGFSGGR LSNFGPADMY SVQSSRGPTP RPSNFDESSA SKSHHTGGKS
301: NSHDAKELHM FVWGSNSPVS DRPGLPLSGG SNEQAGVSDQ GAKEIRMLVS DPPEAAPTNG DFGGEEESGK VKEVPNGLHK LRCNSTAELN PKEAVETGET
401: GPGKHMPPAS VMTRLILIMV WRKLIRNPNT YSSLIGLIWA LVAFRWNVAM PKIIQGSISI LSDAGLGMAM FSLGLFMALQ PKLIACGNST ATFAMAVRFL
501: TGPAVMAVAA MAIGLRGDLL RVAIVQAALP QGIVPFVFAK EYNVHPAILS TGVIFGMLIA LPITLVYYIL LGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQVVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEVGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YSVMGFSGGR LSNFGPADMY SVQSSRGPTP RPSNFDESSA SKSHHTGGKS
301: NSHDAKELHM FVWGSNSPVS DRPGLPLSGG SNEQAGVSDQ GAKEIRMLVS DPPEAAPTNG DFGGEEESGK VKEVPNGLHK LRCNSTAELN PKEAVETGET
401: GPGKHMPPAS VMTRLILIMV WRKLIRNPNT YSSLIGLIWA LVAFRWNVAM PKIIQGSISI LSDAGLGMAM FSLGLFMALQ PKLIACGNST ATFAMAVRFL
501: TGPAVMAVAA MAIGLRGDLL RVAIVQAALP QGIVPFVFAK EYNVHPAILS TGVIFGMLIA LPITLVYYIL LGL
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGLFMA LQPKLIACGN STATFAMAVR FFTGPAVMAV AAMAIGLRGD LLRVAIVQAA LPQGIVPFVF AKEYNVHPAI LSTGVIFGML
601: IALPITLVYY ILLGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGLFMA LQPKLIACGN STATFAMAVR FFTGPAVMAV AAMAIGLRGD LLRVAIVQAA LPQGIVPFVF AKEYNVHPAI LSTGVIFGML
601: IALPITLVYY ILLGL
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.