Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G23080.1 | CDX73342 | AT1G35670.1 | 19130088 |
| AT1G23080.1 | CDY37101 | AT1G35670.1 | 19130088 |
| AT1G23080.1 | CDX90725 | AT4G09570.1 | 19130088 |
| AT1G23080.1 | CDY05064 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25767 | Canola | plasma membrane | 97.74 | 97.91 |
| Bra012358.1-P | Field mustard | golgi, plasma membrane | 97.56 | 92.87 |
| AT1G23080.1 | Thale cress | plasma membrane | 90.94 | 84.33 |
| CDX68327 | Canola | plasma membrane | 70.91 | 83.92 |
| CDX96288 | Canola | golgi, plasma membrane | 84.49 | 83.19 |
| CDY68262 | Canola | plasma membrane | 84.49 | 83.05 |
| CDY23471 | Canola | golgi, plasma membrane | 71.25 | 82.96 |
| CDX91695 | Canola | plasma membrane | 82.23 | 82.66 |
| CDY41467 | Canola | plasma membrane | 83.1 | 81.68 |
| CDY40380 | Canola | plasma membrane | 79.79 | 81.49 |
| CDY63826 | Canola | plasma membrane | 79.27 | 80.82 |
| Solyc05g008060.2.1 | Tomato | nucleus | 82.4 | 72.43 |
| PGSC0003DMT400078330 | Potato | golgi, plasma membrane | 82.4 | 72.32 |
| Solyc04g007690.2.1 | Tomato | plasma membrane | 76.31 | 71.45 |
| VIT_01s0011g04860.t01 | Wine grape | golgi, plasma membrane | 80.49 | 71.19 |
| KRH38202 | Soybean | plasma membrane | 78.05 | 70.66 |
| CDY09501 | Canola | plasma membrane | 69.16 | 70.39 |
| KRH50369 | Soybean | plasma membrane | 81.01 | 69.92 |
| KRG89296 | Soybean | plasma membrane | 80.66 | 69.52 |
| KRH49577 | Soybean | plasma membrane | 66.2 | 68.35 |
| GSMUA_Achr8P29780_001 | Banana | golgi, plasma membrane, vacuole | 55.92 | 66.32 |
| CDX82059 | Canola | golgi, plasma membrane | 60.45 | 65.97 |
| CDX96484 | Canola | plasma membrane | 61.32 | 65.79 |
| PGSC0003DMT400015267 | Potato | cytosol | 52.61 | 65.09 |
| GSMUA_Achr7P17140_001 | Banana | plasma membrane | 64.98 | 64.09 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 67.77 | 64.09 |
| TraesCS3D01G221900.1 | Wheat | plasma membrane | 65.33 | 63.56 |
| TraesCS3A01G231500.1 | Wheat | plasma membrane | 65.85 | 63.53 |
| CDY47745 | Canola | golgi, plasma membrane | 63.41 | 63.41 |
| Os01t0643300-01 | Rice | golgi, plasma membrane, vacuole | 68.12 | 63.27 |
| Zm00001d044083_P001 | Maize | plasma membrane | 66.38 | 62.46 |
| CDY38263 | Canola | plasma membrane | 58.54 | 58.13 |
| EES01159 | Sorghum | golgi, plasma membrane | 66.03 | 58.04 |
| CDY11886 | Canola | plasma membrane | 62.02 | 57.51 |
| CDY20694 | Canola | plasma membrane | 62.02 | 56.06 |
| Zm00001d045219_P001 | Maize | plasma membrane | 56.45 | 55.77 |
| CDY53978 | Canola | plasma membrane | 57.67 | 55.54 |
| EER89254 | Sorghum | golgi, plasma membrane, vacuole | 58.01 | 55.5 |
| CDY72296 | Canola | golgi, plasma membrane | 43.73 | 55.41 |
| TraesCS1D01G422900.1 | Wheat | golgi, plasma membrane, vacuole | 57.32 | 55.2 |
| CDY69709 | Canola | plasma membrane | 58.19 | 55.12 |
| TraesCS1B01G445400.1 | Wheat | golgi, plasma membrane, vacuole | 57.32 | 55.11 |
| CDX88606 | Canola | plasma membrane | 61.67 | 55.05 |
| TraesCS3B01G260700.1 | Wheat | plasma membrane | 58.01 | 54.68 |
| Os05t0576900-01 | Rice | golgi, plasma membrane, vacuole | 56.27 | 54.65 |
| TraesCS1A01G415400.1 | Wheat | golgi, plasma membrane, vacuole | 56.45 | 54.09 |
| CDY63766 | Canola | golgi, plasma membrane | 25.61 | 49.49 |
| CDX85565 | Canola | plasma membrane | 30.84 | 48.9 |
| CDX87543 | Canola | plasma membrane | 47.74 | 48.32 |
| CDX88341 | Canola | plasma membrane | 47.74 | 48.32 |
| CDY67254 | Canola | golgi, plasma membrane, vacuole | 29.27 | 48.28 |
| CDX69445 | Canola | golgi, plasma membrane, vacuole | 29.27 | 48.28 |
| CDX70699 | Canola | golgi, plasma membrane, vacuole | 29.09 | 47.99 |
| CDX69551 | Canola | endoplasmic reticulum, extracellular, vacuole | 18.29 | 46.88 |
| CDX78697 | Canola | plasma membrane | 29.09 | 42.39 |
| CDY66594 | Canola | plasma membrane | 32.23 | 41.2 |
| HORVU7Hr1G038700.9 | Barley | nucleus, plastid | 25.78 | 21.3 |
| CDX85566 | Canola | cytosol | 2.96 | 6.16 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | GO:A0A078FH18 | UniProt:A0A078FH18 | InterPro:Auxin_eff_plant | EnsemblPlants:CDY12491 |
| ProteinID:CDY12491 | ProteinID:CDY12491.1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00061807001 | InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF36 |
| TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI0004EDF816 | SEG:seg | : | : |
Description
BnaC07g13310DAuxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A078FH18]
Coordinates
chrLK032023:+:310474..313370
Molecular Weight (calculated)
62426.3 Da
IEP (calculated)
7.950
GRAVY (calculated)
0.274
Length
574 amino acids
Sequence
(BLAST)
(BLAST)
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GIKRFVAIFA VPLLSFHFIS TNNPYAMNLH FIAADTLQKL IMLSLLTLWA NFTRAGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQVVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGAN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YSVMGFSGGR LSNFGPADMY SVQSSRGPTP RPSNFDESSA SKSHPTGGKL
301: KSHDAKELHM FVWGSNGSPV SDRPGLQVSG GSNEQAGVSD QGAKEIRMLV SDPPEAAPTN GEFGGEEESG KVKEVPNGLH KLRCNSTVEL NPKEAVETGE
401: TGQGKHMPPA SVMTRLILIM VWRKLIRNPN TYSSLIGLIW ALVAFRWNVA MPKIIQGSIS ILSDAGLGMA MFSLGLFMAL QPKLIACGNS TATFAMAVRF
501: LTGPAVMAVA AMAIGLRGDL LRVAIVQAAL PQGIVPFVFA KEYNVHPAIL STGVIFGMLI ALPITLVYYI LLGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQVVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGAN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YSVMGFSGGR LSNFGPADMY SVQSSRGPTP RPSNFDESSA SKSHPTGGKL
301: KSHDAKELHM FVWGSNGSPV SDRPGLQVSG GSNEQAGVSD QGAKEIRMLV SDPPEAAPTN GEFGGEEESG KVKEVPNGLH KLRCNSTVEL NPKEAVETGE
401: TGQGKHMPPA SVMTRLILIM VWRKLIRNPN TYSSLIGLIW ALVAFRWNVA MPKIIQGSIS ILSDAGLGMA MFSLGLFMAL QPKLIACGNS TATFAMAVRF
501: LTGPAVMAVA AMAIGLRGDL LRVAIVQAAL PQGIVPFVFA KEYNVHPAIL STGVIFGMLI ALPITLVYYI LLGL
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGLFMA LQPKLIACGN STATFAMAVR FFTGPAVMAV AAMAIGLRGD LLRVAIVQAA LPQGIVPFVF AKEYNVHPAI LSTGVIFGML
601: IALPITLVYY ILLGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGLFMA LQPKLIACGN STATFAMAVR FFTGPAVMAV AAMAIGLRGD LLRVAIVQAA LPQGIVPFVF AKEYNVHPAI LSTGVIFGML
601: IALPITLVYY ILLGL
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.