Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH49577 | Soybean | plasma membrane | 80.76 | 92.09 |
| KRG89296 | Soybean | plasma membrane | 83.91 | 79.88 |
| KRH50369 | Soybean | plasma membrane | 83.75 | 79.85 |
| CDX96288 | Canola | golgi, plasma membrane | 72.71 | 79.07 |
| CDY68262 | Canola | plasma membrane | 72.71 | 78.94 |
| CDY25767 | Canola | plasma membrane | 71.14 | 78.71 |
| VIT_01s0011g04860.t01 | Wine grape | golgi, plasma membrane | 80.28 | 78.43 |
| CDY23471 | Canola | golgi, plasma membrane | 60.73 | 78.09 |
| CDY12491 | Canola | plasma membrane | 70.66 | 78.05 |
| Bra012358.1-P | Field mustard | golgi, plasma membrane | 73.97 | 77.78 |
| CDX68327 | Canola | plasma membrane | 59.31 | 77.53 |
| Solyc04g007690.2.1 | Tomato | plasma membrane | 74.76 | 77.32 |
| CDY63826 | Canola | plasma membrane | 68.45 | 77.09 |
| PGSC0003DMT400078330 | Potato | golgi, plasma membrane | 79.34 | 76.91 |
| Solyc05g008060.2.1 | Tomato | nucleus | 79.18 | 76.88 |
| CDY40380 | Canola | plasma membrane | 67.82 | 76.51 |
| AT1G23080.1 | Thale cress | plasma membrane | 74.45 | 76.25 |
| CDX91695 | Canola | plasma membrane | 67.98 | 75.48 |
| AT1G70940.1 | Thale cress | plasma membrane | 75.87 | 75.16 |
| AT2G01420.2 | Thale cress | plasma membrane | 71.45 | 73.54 |
| CDY41467 | Canola | plasma membrane | 67.67 | 73.46 |
| Bra016366.1-P | Field mustard | golgi, plasma membrane | 67.51 | 73.29 |
| PGSC0003DMT400015267 | Potato | cytosol | 53.15 | 72.63 |
| Bra003938.1-P | Field mustard | golgi, plasma membrane | 61.36 | 71.25 |
| GSMUA_Achr8P29780_001 | Banana | golgi, plasma membrane, vacuole | 54.26 | 71.07 |
| KRH18110 | Soybean | extracellular | 14.04 | 70.63 |
| GSMUA_Achr7P17140_001 | Banana | plasma membrane | 64.83 | 70.62 |
| KRH41847 | Soybean | golgi, plasma membrane | 65.14 | 68.49 |
| KRH66749 | Soybean | plasma membrane | 64.35 | 68.34 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 65.3 | 68.2 |
| Os01t0643300-01 | Rice | golgi, plasma membrane, vacuole | 66.4 | 68.12 |
| Bra016173.1-P | Field mustard | plasma membrane | 67.82 | 68.04 |
| KRH48642 | Soybean | plasma membrane | 64.35 | 67.44 |
| CDY09501 | Canola | plasma membrane | 59.62 | 67.02 |
| TraesCS3D01G221900.1 | Wheat | plasma membrane | 62.3 | 66.95 |
| TraesCS3A01G231500.1 | Wheat | plasma membrane | 61.99 | 66.05 |
| Zm00001d044083_P001 | Maize | plasma membrane | 63.09 | 65.57 |
| KRG95082 | Soybean | plasma membrane | 48.27 | 63.62 |
| KRH39071 | Soybean | plasma membrane | 41.48 | 62.62 |
| EES01159 | Sorghum | golgi, plasma membrane | 64.04 | 62.17 |
| KRH02749 | Soybean | plasma membrane | 61.67 | 61.38 |
| KRH19119 | Soybean | endoplasmic reticulum | 61.2 | 60.44 |
| KRH37366 | Soybean | plasma membrane | 41.32 | 59.14 |
| Zm00001d045219_P001 | Maize | plasma membrane | 53.94 | 58.86 |
| TraesCS3B01G260700.1 | Wheat | plasma membrane | 56.15 | 58.46 |
| Os05t0576900-01 | Rice | golgi, plasma membrane, vacuole | 54.26 | 58.21 |
| EER89254 | Sorghum | golgi, plasma membrane, vacuole | 54.89 | 58.0 |
| TraesCS1D01G422900.1 | Wheat | golgi, plasma membrane, vacuole | 53.94 | 57.38 |
| TraesCS1B01G445400.1 | Wheat | golgi, plasma membrane, vacuole | 53.79 | 57.12 |
| KRH15941 | Soybean | plasma membrane | 47.48 | 56.69 |
| TraesCS1A01G415400.1 | Wheat | golgi, plasma membrane, vacuole | 53.15 | 56.26 |
| KRH12968 | Soybean | plasma membrane | 42.43 | 54.67 |
| Bra026669.1-P | Field mustard | golgi, plasma membrane | 68.45 | 54.45 |
| KRH01128 | Soybean | plasma membrane | 30.6 | 54.04 |
| KRH40132 | Soybean | plasma membrane | 30.44 | 53.91 |
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 30.13 | 52.76 |
| KRH37897 | Soybean | plasma membrane | 40.22 | 52.36 |
| KRH04363 | Soybean | endoplasmic reticulum, plasma membrane | 29.97 | 52.34 |
| KRH18109 | Soybean | plasma membrane | 28.08 | 50.86 |
| KRH00905 | Soybean | golgi, plasma membrane, vacuole | 26.18 | 44.99 |
| KRH12361 | Soybean | endoplasmic reticulum, golgi | 32.65 | 44.14 |
| KRH40330 | Soybean | golgi, plasma membrane, vacuole | 25.87 | 43.5 |
| HORVU7Hr1G038700.9 | Barley | nucleus, plastid | 23.82 | 21.73 |
Protein Annotations
| EntrezGene:100791394 | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | EMBL:ACUP02005756 | InterPro:Auxin_eff_plant | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_09G117900 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009926 | GO:GO:0009987 | GO:GO:0010252 |
| GO:GO:0010315 | GO:GO:0010329 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | UniProt:I1L2S6 |
| EMBL:KC344371 | EnsemblPlants:KRH38202 | ProteinID:KRH38202 | ProteinID:KRH38202.1 | InterPro:Mem_trans | PFAM:PF03547 |
| PANTHER:PTHR31752 | PANTHER:PTHR31752:SF36 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI000233830B | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:+:27962786..27968343
Molecular Weight (calculated)
69341.2 Da
IEP (calculated)
7.794
GRAVY (calculated)
0.179
Length
634 amino acids
Sequence
(BLAST)
(BLAST)
001: MITWKDLYMV LTAVVPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNFR FIAADTLQKI IMLFALAIWT NLTKTGSLEW
101: MITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQVVVLQ CIIWYTLLLF LFEYRAAKIL IMEQFPETAA SIVSFKVDSD VVSLDGRDFL ETDAEVGDDG
201: KLHVTVRKSN ASRRSFMMTP RPSNLTGAEI YSLSSSRNPT PRGSNFNHAD FFSMMGYQPR HSNFTANDLF SSRGPTPRPS NFEESSMPQA ATVASPRFGF
301: YPSQTVPASY PPPNPEFSSS TKHLKSQSQN SLTPANGAHD AKELHMFVWS SSASPVSENA GLNVFGNTEL GTSQQPDQGG AKEIRMLVAD NHAHLQNGEA
401: NNKGGLEAGL DVEEFKFPVN GGEQVEEEKE KEKEGLNNGL NKLGSSSTAE LHPKAAGAAE APASKHMPPA SVMTRLILIM VWRKLIRNPN TYSSLIGVVW
501: SLIAFRWHVH MPKIIEKSIS ILSDAGLGMA MFSLGLFMAL QPKIIACGNS VATFAMAIRF LTGPAVMAAA SIAVGLRGTL LHVAIVQAAL PQGIVPFVFA
601: KEYNAHPAIL STAVIFGMLI ALPITLVYYI LLGL
101: MITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQVVVLQ CIIWYTLLLF LFEYRAAKIL IMEQFPETAA SIVSFKVDSD VVSLDGRDFL ETDAEVGDDG
201: KLHVTVRKSN ASRRSFMMTP RPSNLTGAEI YSLSSSRNPT PRGSNFNHAD FFSMMGYQPR HSNFTANDLF SSRGPTPRPS NFEESSMPQA ATVASPRFGF
301: YPSQTVPASY PPPNPEFSSS TKHLKSQSQN SLTPANGAHD AKELHMFVWS SSASPVSENA GLNVFGNTEL GTSQQPDQGG AKEIRMLVAD NHAHLQNGEA
401: NNKGGLEAGL DVEEFKFPVN GGEQVEEEKE KEKEGLNNGL NKLGSSSTAE LHPKAAGAAE APASKHMPPA SVMTRLILIM VWRKLIRNPN TYSSLIGVVW
501: SLIAFRWHVH MPKIIEKSIS ILSDAGLGMA MFSLGLFMAL QPKIIACGNS VATFAMAIRF LTGPAVMAAA SIAVGLRGTL LHVAIVQAAL PQGIVPFVFA
601: KEYNAHPAIL STAVIFGMLI ALPITLVYYI LLGL
001: MISWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNLR FIAADTLQKI IMLSLLVLWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEFRGAKML IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YNMMGFPGGR LSNFGPADMY SVQSSRGPTP RPSNFEENCA MASSPRFGYY
301: PGGGAGSYPA PNPEFSSTTT STANKSVNKN PKDVNTNQQT TLPTGGKSNS HDAKELHMFV WSSNGSPVSD RAGLNVFGGA PDNDQGGRSD QGAKEIRMLV
401: PDQSHNGETK AVAHPASGDF GGEQQFSFAG KEEEAERPKD AENGLNKLAP NSTAALQSKT GLGGAEASQR KNMPPASVMT RLILIMVWRK LIRNPNTYSS
501: LIGLIWALVA FRWHVAMPKI IQQSISILSD AGLGMAMFSL GLFMALQPKL IACGNSVATF AMAVRFLTGP AVMAVAAIAI GLRGDLLRVA IVQAALPQGI
601: VPFVFAKEYN VHPAILSTGV IFGMLIALPI TLVYYILLGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEFRGAKML IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YNMMGFPGGR LSNFGPADMY SVQSSRGPTP RPSNFEENCA MASSPRFGYY
301: PGGGAGSYPA PNPEFSSTTT STANKSVNKN PKDVNTNQQT TLPTGGKSNS HDAKELHMFV WSSNGSPVSD RAGLNVFGGA PDNDQGGRSD QGAKEIRMLV
401: PDQSHNGETK AVAHPASGDF GGEQQFSFAG KEEEAERPKD AENGLNKLAP NSTAALQSKT GLGGAEASQR KNMPPASVMT RLILIMVWRK LIRNPNTYSS
501: LIGLIWALVA FRWHVAMPKI IQQSISILSD AGLGMAMFSL GLFMALQPKL IACGNSVATF AMAVRFLTGP AVMAVAAIAI GLRGDLLRVA IVQAALPQGI
601: VPFVFAKEYN VHPAILSTGV IFGMLIALPI TLVYYILLGL
Arabidopsis Description
PIN3Auxin efflux carrier component 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Z8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.