Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15941 | Soybean | plasma membrane | 97.62 | 23.16 |
| GSMUA_Achr3P22010_001 | Banana | plasma membrane | 80.16 | 19.92 |
| PGSC0003DMT400079013 | Potato | plasma membrane | 82.54 | 19.7 |
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 55.56 | 19.34 |
| VIT_18s0001g15420.t01 | Wine grape | plasma membrane | 83.33 | 19.09 |
| KRH04363 | Soybean | endoplasmic reticulum, plasma membrane | 54.76 | 19.01 |
| KRH40132 | Soybean | plasma membrane | 53.17 | 18.72 |
| KRH00905 | Soybean | golgi, plasma membrane, vacuole | 53.97 | 18.43 |
| KRH01128 | Soybean | plasma membrane | 52.38 | 18.38 |
| KRH40330 | Soybean | golgi, plasma membrane, vacuole | 54.76 | 18.3 |
| GSMUA_Achr8P08300_001 | Banana | plasma membrane | 80.95 | 17.83 |
| KRG95082 | Soybean | plasma membrane | 67.46 | 17.67 |
| KRH37366 | Soybean | plasma membrane | 60.32 | 17.16 |
| Solyc06g059730.1.1 | Tomato | plasma membrane | 69.05 | 16.73 |
| AT1G77110.1 | Thale cress | plasma membrane | 70.63 | 15.61 |
| CDX88341 | Canola | plasma membrane | 69.84 | 15.52 |
| CDX87543 | Canola | plasma membrane | 69.05 | 15.34 |
| KRH12968 | Soybean | plasma membrane | 59.52 | 15.24 |
| Bra015694.1-P | Field mustard | plasma membrane | 69.05 | 15.16 |
| KRH37897 | Soybean | plasma membrane | 57.94 | 14.99 |
| KRH41847 | Soybean | golgi, plasma membrane | 71.43 | 14.93 |
| KRH66749 | Soybean | plasma membrane | 70.63 | 14.91 |
| KRH48642 | Soybean | plasma membrane | 69.84 | 14.55 |
| KRH38202 | Soybean | plasma membrane | 70.63 | 14.04 |
| KRH02749 | Soybean | plasma membrane | 69.84 | 13.81 |
| KRH19119 | Soybean | endoplasmic reticulum | 69.84 | 13.71 |
| KRH50369 | Soybean | plasma membrane | 69.84 | 13.23 |
| KRG89296 | Soybean | plasma membrane | 69.84 | 13.21 |
| KRH49577 | Soybean | plasma membrane | 56.35 | 12.77 |
| KRH12361 | Soybean | endoplasmic reticulum, golgi | 34.92 | 9.38 |
| KRH18109 | Soybean | plasma membrane | 1.59 | 0.57 |
| KRH39071 | Soybean | plasma membrane | 1.59 | 0.48 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | EMBL:ACUP02008031 | EnsemblPlantsGene:GLYMA_13G038400 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009926 |
| GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010315 | GO:GO:0010329 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | UniProt:K7LY06 | EnsemblPlants:KRH18110 | ProteinID:KRH18110 | ProteinID:KRH18110.1 | InterPro:Mem_trans |
| PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF8 | TMHMM:TMhelix | UniParc:UPI0002948F20 | : |
Description
hypothetical protein
Coordinates
chr13:+:11853715..11856633
Molecular Weight (calculated)
13630.6 Da
IEP (calculated)
9.746
GRAVY (calculated)
1.009
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMPSLIKAS VKIISDAGLG MAMFSLGLFM ALQPRIIACG TKRAVMGMVI RFMCGPLVMS ASSIVIGLRQ DRLHTAIVQA ALPQGIVPFI FAREYGLHPD
101: ILSTGVIFGM LISLPITLLY YIFLGL
101: ILSTGVIFGM LISLPITLLY YIFLGL
001: MITGNEFYTV MCAMAPLYFA MFVAYGSVKW CKIFTPAQCS GINRFVSVFA VPVLSFHFIS QNNPYKMDTM FILADTLSKI FVFVLLSLWA VFFKAGGLDW
101: LITLFSIATL PNTLVMGIPL LQAMYGDYTQ TLMVQLVVLQ CIIWYTLLLF LFELRAARLL IRAEFPGQAA GSIAKIQVDD DVISLDGMDP LRTETETDVN
201: GRIRLRIRRS VSSVPDSVMS SSLCLTPRAS NLSNAEIFSV NTPNNRFFHG GGGSGTLQFY NGSNEIMFCN GDLGGFGFTR PGLGASPRRL SGYASSDAYS
301: LQPTPRASNF NELDVNGNGT PVWMKSPAAG RIYRQSSPKM MWESGQRHAA KDINGSVPEK EISFRDALKA APQATAAGGG ASMEEGAAGK DTTPVAAIGK
401: QEMPSAIVMM RLILTVVGRK LSRNPNTYSS LLGLVWSLIS FKWNIPMPNI VDFSIKIISD AGLGMAMFSL GLFMALQPKM IPCGAKKATM GMLIRFISGP
501: LFMAGASLLV GLRGSRLHAA IVQAALPQGI VPFVFAREYN LHPDLLSTLV IFGMIVSLPV TILYYVLLGL
101: LITLFSIATL PNTLVMGIPL LQAMYGDYTQ TLMVQLVVLQ CIIWYTLLLF LFELRAARLL IRAEFPGQAA GSIAKIQVDD DVISLDGMDP LRTETETDVN
201: GRIRLRIRRS VSSVPDSVMS SSLCLTPRAS NLSNAEIFSV NTPNNRFFHG GGGSGTLQFY NGSNEIMFCN GDLGGFGFTR PGLGASPRRL SGYASSDAYS
301: LQPTPRASNF NELDVNGNGT PVWMKSPAAG RIYRQSSPKM MWESGQRHAA KDINGSVPEK EISFRDALKA APQATAAGGG ASMEEGAAGK DTTPVAAIGK
401: QEMPSAIVMM RLILTVVGRK LSRNPNTYSS LLGLVWSLIS FKWNIPMPNI VDFSIKIISD AGLGMAMFSL GLFMALQPKM IPCGAKKATM GMLIRFISGP
501: LFMAGASLLV GLRGSRLHAA IVQAALPQGI VPFVFAREYN LHPDLLSTLV IFGMIVSLPV TILYYVLLGL
Arabidopsis Description
PIN6Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178W8W8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.