Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48642 | Soybean | plasma membrane | 95.0 | 65.95 |
| KRH41847 | Soybean | golgi, plasma membrane | 82.14 | 57.21 |
| VIT_17s0000g02420.t01 | Wine grape | plasma membrane | 80.71 | 57.07 |
| CDY72296 | Canola | golgi, plasma membrane | 60.95 | 56.51 |
| Solyc03g118740.2.1 | Tomato | golgi, plasma membrane | 77.86 | 53.52 |
| PGSC0003DMT400014752 | Potato | golgi, plasma membrane | 77.14 | 52.77 |
| CDY47745 | Canola | golgi, plasma membrane | 70.71 | 51.74 |
| CDX82059 | Canola | golgi, plasma membrane | 64.29 | 51.33 |
| Bra015983.1-P | Field mustard | plasma membrane | 75.0 | 50.97 |
| CDX96484 | Canola | plasma membrane | 64.76 | 50.84 |
| Bra008105.1-P | Field mustard | golgi, plasma membrane | 74.52 | 50.81 |
| AT1G73590.1 | Thale cress | plasma membrane | 75.0 | 50.64 |
| KRH18109 | Soybean | plasma membrane | 40.71 | 48.86 |
| KRH66749 | Soybean | plasma membrane | 64.52 | 45.39 |
| KRH38202 | Soybean | plasma membrane | 62.62 | 41.48 |
| KRH50369 | Soybean | plasma membrane | 63.57 | 40.15 |
| KRG89296 | Soybean | plasma membrane | 63.57 | 40.09 |
| KRH49577 | Soybean | plasma membrane | 50.95 | 38.49 |
| KRH02749 | Soybean | plasma membrane | 57.62 | 37.99 |
| KRH19119 | Soybean | endoplasmic reticulum | 56.9 | 37.23 |
| KRG95082 | Soybean | plasma membrane | 41.67 | 36.38 |
| KRH12968 | Soybean | plasma membrane | 40.24 | 34.35 |
| KRH37366 | Soybean | plasma membrane | 36.19 | 34.31 |
| KRH15941 | Soybean | plasma membrane | 43.33 | 34.27 |
| KRH12361 | Soybean | endoplasmic reticulum, golgi | 35.48 | 31.77 |
| KRH37897 | Soybean | plasma membrane | 35.71 | 30.8 |
| KRH01128 | Soybean | plasma membrane | 24.05 | 28.13 |
| KRH04363 | Soybean | endoplasmic reticulum, plasma membrane | 23.57 | 27.27 |
| KRH40132 | Soybean | plasma membrane | 23.1 | 27.09 |
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 23.33 | 27.07 |
| KRH00905 | Soybean | golgi, plasma membrane, vacuole | 19.76 | 22.49 |
| KRH40330 | Soybean | golgi, plasma membrane, vacuole | 19.76 | 22.02 |
| KRH18110 | Soybean | extracellular | 0.48 | 1.59 |
| CDX85566 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | UniProt:A0A0R0IJY3 | EMBL:ACUP02005910 | EnsemblPlantsGene:GLYMA_09G176300 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | EnsemblPlants:KRH39071 |
| ProteinID:KRH39071 | ProteinID:KRH39071.1 | InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF14 |
| TMHMM:TMhelix | UniParc:UPI0006EDF2E2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:40077662..40078924
Molecular Weight (calculated)
46323.7 Da
IEP (calculated)
9.487
GRAVY (calculated)
-0.057
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MITLTDFYHV MTAMVPLYVA MILAYGSVKW WKIFSPDQCS GINRFVALFA VPLLSFHFIA SNNPYEMNLR FLAADTLQKI IILVLLAVWS NITKRGCLEW
101: AITLFSLSTL PNTLVMGIPL LKGMYGDFSG SLMVQIVVLQ CIIWYTLMLF LFEFRGARML ISEQFPDTAA SIVSIHVDSD VMSLDGRQPL ETEAEIKEDG
201: KLHVTVRKSN ASRSDIFSRR SQGLSSTTPR PSNLTNAEIY SLQSSRNPTP RGSSFNHTDF YSMMAAGGRN SNFGASDVYG LSASRGPTPR PSNYDEDGGK
301: PKFHYHAAGG TGHYPAPNPG MFSPSNGSKS VAANANAKRP NGQAQLKPED GNRDLHMFVW SSSASPVSDV FGAHEYGGGH DQKEVKLNVS PGKGFIFVFV
401: LSRLDFLRNL FRSKLKLLAS
101: AITLFSLSTL PNTLVMGIPL LKGMYGDFSG SLMVQIVVLQ CIIWYTLMLF LFEFRGARML ISEQFPDTAA SIVSIHVDSD VMSLDGRQPL ETEAEIKEDG
201: KLHVTVRKSN ASRSDIFSRR SQGLSSTTPR PSNLTNAEIY SLQSSRNPTP RGSSFNHTDF YSMMAAGGRN SNFGASDVYG LSASRGPTPR PSNYDEDGGK
301: PKFHYHAAGG TGHYPAPNPG MFSPSNGSKS VAANANAKRP NGQAQLKPED GNRDLHMFVW SSSASPVSDV FGAHEYGGGH DQKEVKLNVS PGKGFIFVFV
401: LSRLDFLRNL FRSKLKLLAS
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.