Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18110 | Soybean | extracellular | 17.16 | 60.32 |
| KRH12968 | Soybean | plasma membrane | 58.01 | 52.24 |
| KRH37897 | Soybean | plasma membrane | 55.53 | 50.51 |
| KRH01128 | Soybean | plasma membrane | 38.6 | 47.63 |
| KRH40132 | Soybean | plasma membrane | 37.47 | 46.37 |
| KRH02749 | Soybean | plasma membrane | 66.59 | 46.31 |
| KRH19119 | Soybean | endoplasmic reticulum | 66.59 | 45.95 |
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 37.02 | 45.3 |
| KRH04363 | Soybean | endoplasmic reticulum, plasma membrane | 36.79 | 44.9 |
| KRH15941 | Soybean | plasma membrane | 53.5 | 44.63 |
| KRH41847 | Soybean | golgi, plasma membrane | 58.47 | 42.95 |
| KRH49577 | Soybean | plasma membrane | 53.72 | 42.81 |
| KRH12361 | Soybean | endoplasmic reticulum, golgi | 45.15 | 42.64 |
| KRH66749 | Soybean | plasma membrane | 57.11 | 42.38 |
| KRH48642 | Soybean | plasma membrane | 57.56 | 42.15 |
| KRH38202 | Soybean | plasma membrane | 59.14 | 41.32 |
| KRH00905 | Soybean | golgi, plasma membrane, vacuole | 33.63 | 40.38 |
| KRH40330 | Soybean | golgi, plasma membrane, vacuole | 33.86 | 39.79 |
| KRG89296 | Soybean | plasma membrane | 57.79 | 38.44 |
| KRH18109 | Soybean | plasma membrane | 30.25 | 38.29 |
| KRH50369 | Soybean | plasma membrane | 57.34 | 38.2 |
| KRG95082 | Soybean | plasma membrane | 39.73 | 36.59 |
| KRH39071 | Soybean | plasma membrane | 34.31 | 36.19 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | EMBL:ACUP02005440 | InterPro:Auxin_eff_plant | EnsemblPlantsGene:GLYMA_09G061800 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009734 | GO:GO:0009926 | GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010315 | GO:GO:0010329 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | UniProt:K7LC37 | EnsemblPlants:KRH37366 | ProteinID:KRH37366 |
| ProteinID:KRH37366.1 | InterPro:Mem_trans | PFAM:PF03547 | InterPro:PIN2 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF4 |
| TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI000296F53C | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr9:-:5841491..5845245
Molecular Weight (calculated)
49506.5 Da
IEP (calculated)
9.377
GRAVY (calculated)
0.530
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKGKDIYEV VAALVPLYLA LFLAYGSVRW LKIFTQEQCS GISRFVSVFA VPFLSFDFIS SNNPYTMNLR FLAADSLQKI VVLLALFLFN TFTKWGSIDW
101: SITLFSLITL PNTLVMGDPL LKAMYGEFTH ALMTQIVVLQ SVIWYTLLLV LFEYRGAKLL ISEQFPETAG SIATLRVDSS VSSLNGREPL HADAEVGENG
201: QLHVVVRSMS RSVSMASSFH KSYSTGVEIY PFPSSREQTT VHELEEIREG IEHPVMGRRR ELSIEEDDGN KRQQMPRVSV MIKLILTMVW RNLLRNPNAW
301: ASVFGLVWSL IFFRWNIAMP KIVRKCIDII SHTGLGMAMF SLGLFMALQP KIITCGKTRA TISLVIRFLI GPAVILATSK AMSIHGVLLN VAIVQAALPQ
401: GIVPFVFAKE YNLHPDILST AVIFGMVVAL PVTIIYYVVL GVL
101: SITLFSLITL PNTLVMGDPL LKAMYGEFTH ALMTQIVVLQ SVIWYTLLLV LFEYRGAKLL ISEQFPETAG SIATLRVDSS VSSLNGREPL HADAEVGENG
201: QLHVVVRSMS RSVSMASSFH KSYSTGVEIY PFPSSREQTT VHELEEIREG IEHPVMGRRR ELSIEEDDGN KRQQMPRVSV MIKLILTMVW RNLLRNPNAW
301: ASVFGLVWSL IFFRWNIAMP KIVRKCIDII SHTGLGMAMF SLGLFMALQP KIITCGKTRA TISLVIRFLI GPAVILATSK AMSIHGVLLN VAIVQAALPQ
401: GIVPFVFAKE YNLHPDILST AVIFGMVVAL PVTIIYYVVL GVL
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.