Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68262 | Canola | plasma membrane | 85.94 | 94.18 |
| CDX96288 | Canola | golgi, plasma membrane | 85.62 | 94.0 |
| CDY23471 | Canola | golgi, plasma membrane | 70.94 | 92.09 |
| CDX68327 | Canola | plasma membrane | 69.69 | 91.96 |
| Bra003938.1-P | Field mustard | golgi, plasma membrane | 77.5 | 90.84 |
| AT1G23080.1 | Thale cress | plasma membrane | 84.38 | 87.24 |
| Bra016173.1-P | Field mustard | plasma membrane | 82.97 | 84.02 |
| AT2G01420.2 | Thale cress | plasma membrane | 76.25 | 79.22 |
| PGSC0003DMT400078330 | Potato | golgi, plasma membrane | 78.91 | 77.22 |
| VIT_01s0011g04860.t01 | Wine grape | golgi, plasma membrane | 78.28 | 77.2 |
| Solyc05g008060.2.1 | Tomato | nucleus | 78.75 | 77.18 |
| Solyc04g007690.2.1 | Tomato | plasma membrane | 73.91 | 77.16 |
| CDY09501 | Canola | plasma membrane | 67.81 | 76.95 |
| KRH38202 | Soybean | plasma membrane | 75.16 | 75.87 |
| KRH50369 | Soybean | plasma membrane | 78.44 | 75.49 |
| KRG89296 | Soybean | plasma membrane | 78.28 | 75.23 |
| KRH49577 | Soybean | plasma membrane | 63.44 | 73.02 |
| PGSC0003DMT400015267 | Potato | cytosol | 51.72 | 71.34 |
| GSMUA_Achr8P29780_001 | Banana | golgi, plasma membrane, vacuole | 50.78 | 67.15 |
| GSMUA_Achr7P17140_001 | Banana | plasma membrane | 60.62 | 66.67 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 62.66 | 66.06 |
| TraesCS3D01G221900.1 | Wheat | plasma membrane | 60.16 | 65.25 |
| Os01t0643300-01 | Rice | golgi, plasma membrane, vacuole | 62.97 | 65.21 |
| TraesCS3A01G231500.1 | Wheat | plasma membrane | 60.0 | 64.54 |
| Zm00001d044083_P001 | Maize | plasma membrane | 60.47 | 63.44 |
| AT1G73590.1 | Thale cress | plasma membrane | 60.94 | 62.7 |
| EES01159 | Sorghum | golgi, plasma membrane | 60.62 | 59.42 |
| AT5G57090.1 | Thale cress | golgi, plasma membrane, vacuole | 59.38 | 58.73 |
| Zm00001d045219_P001 | Maize | plasma membrane | 52.19 | 57.49 |
| TraesCS1D01G422900.1 | Wheat | golgi, plasma membrane, vacuole | 53.12 | 57.05 |
| TraesCS1B01G445400.1 | Wheat | golgi, plasma membrane, vacuole | 53.12 | 56.95 |
| Os05t0576900-01 | Rice | golgi, plasma membrane, vacuole | 52.34 | 56.68 |
| TraesCS3B01G260700.1 | Wheat | plasma membrane | 53.59 | 56.32 |
| EER89254 | Sorghum | golgi, plasma membrane, vacuole | 52.66 | 56.17 |
| TraesCS1A01G415400.1 | Wheat | golgi, plasma membrane, vacuole | 52.19 | 55.76 |
| AT5G15100.1 | Thale cress | plasma membrane | 30.47 | 53.13 |
| AT1G77110.1 | Thale cress | plasma membrane | 44.69 | 50.18 |
| AT5G16530.1 | Thale cress | plasma membrane | 26.88 | 49.0 |
| HORVU7Hr1G038700.9 | Barley | nucleus, plastid | 24.06 | 22.16 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | EntrezGene:843432 | UniProt:A0A178WBH3 | ProteinID:AAD55507.1 | ProteinID:AEE35140.1 |
| EMBL:AF087818 | EMBL:AK226890 | ArrayExpress:AT1G70940 | EnsemblPlantsGene:AT1G70940 | RefSeq:AT1G70940 | TAIR:AT1G70940 |
| RefSeq:AT1G70940-TAIR-G | EnsemblPlants:AT1G70940.1 | TAIR:AT1G70940.1 | EMBL:AY136327 | Unigene:At.11573 | InterPro:Auxin_eff_plant |
| EMBL:BT002085 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009416 | GO:GO:0009605 | GO:GO:0009606 | GO:GO:0009628 |
| GO:GO:0009630 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009926 | GO:GO:0009958 |
| GO:GO:0009986 | GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010315 | GO:GO:0010329 | GO:GO:0012506 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0016328 | GO:GO:0030154 |
| GO:GO:0040007 | GO:GO:0048364 | GO:GO:0048766 | GO:GO:0048767 | GO:GO:0055085 | InterPro:Mem_trans |
| RefSeq:NP_177250.1 | ProteinID:OAP15151.1 | PFAM:PF03547 | Symbol:PIN3 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000256 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006081 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF36 | UniProt:Q0WV81 | UniProt:Q9S7Z8 |
| TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI000004844B | SEG:seg | : | : |
Description
PIN3Auxin efflux carrier component 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Z8]
Coordinates
chr1:+:26742940..26746469
Molecular Weight (calculated)
69470.1 Da
IEP (calculated)
8.425
GRAVY (calculated)
0.136
Length
640 amino acids
Sequence
(BLAST)
(BLAST)
001: MISWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNLR FIAADTLQKI IMLSLLVLWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEFRGAKML IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YNMMGFPGGR LSNFGPADMY SVQSSRGPTP RPSNFEENCA MASSPRFGYY
301: PGGGAGSYPA PNPEFSSTTT STANKSVNKN PKDVNTNQQT TLPTGGKSNS HDAKELHMFV WSSNGSPVSD RAGLNVFGGA PDNDQGGRSD QGAKEIRMLV
401: PDQSHNGETK AVAHPASGDF GGEQQFSFAG KEEEAERPKD AENGLNKLAP NSTAALQSKT GLGGAEASQR KNMPPASVMT RLILIMVWRK LIRNPNTYSS
501: LIGLIWALVA FRWHVAMPKI IQQSISILSD AGLGMAMFSL GLFMALQPKL IACGNSVATF AMAVRFLTGP AVMAVAAIAI GLRGDLLRVA IVQAALPQGI
601: VPFVFAKEYN VHPAILSTGV IFGMLIALPI TLVYYILLGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEFRGAKML IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YNMMGFPGGR LSNFGPADMY SVQSSRGPTP RPSNFEENCA MASSPRFGYY
301: PGGGAGSYPA PNPEFSSTTT STANKSVNKN PKDVNTNQQT TLPTGGKSNS HDAKELHMFV WSSNGSPVSD RAGLNVFGGA PDNDQGGRSD QGAKEIRMLV
401: PDQSHNGETK AVAHPASGDF GGEQQFSFAG KEEEAERPKD AENGLNKLAP NSTAALQSKT GLGGAEASQR KNMPPASVMT RLILIMVWRK LIRNPNTYSS
501: LIGLIWALVA FRWHVAMPKI IQQSISILSD AGLGMAMFSL GLFMALQPKL IACGNSVATF AMAVRFLTGP AVMAVAAIAI GLRGDLLRVA IVQAALPQGI
601: VPFVFAKEYN VHPAILSTGV IFGMLIALPI TLVYYILLGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.