Factsheet for Os08t0529000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G258800.1	Wheat	plasma membrane, vacuole	76.76	77.38
TraesCS7D01G259700.1	Wheat	plasma membrane, vacuole	77.57	75.53
PGSC0003DMT400017300	Potato	plasma membrane	17.3	64.65
OQU80833	Sorghum	extracellular	50.0	61.87
Zm00001d031594_P001	Maize	plasma membrane	70.27	59.5
Os01t0919800-01	Rice	plasma membrane	56.49	57.58
PGSC0003DMT400046253	Potato	plasma membrane	48.65	50.7
VIT_04s0023g00450.t01	Wine grape	golgi, plasma membrane	49.19	50.42
Solyc01g068410.2.1	Tomato	extracellular, plasma membrane	48.11	49.72
PGSC0003DMT400017301	Potato	golgi, plasma membrane	21.89	45.76
Os11t0122800-00	Rice	plasma membrane	34.05	42.57
Solyc04g056620.1.1	Tomato	plasma membrane	39.46	42.07
PGSC0003DMT400027309	Potato	extracellular, plasma membrane, vacuole	34.59	39.88
Os01t0802700-01	Rice	plasma membrane	38.11	33.1
Os01t0715600-00	Rice	peroxisome, plasma membrane, plastid	40.81	31.33
Os11t0137000-01	Rice	golgi, plasma membrane	43.78	29.24
Os12t0133800-01	Rice	peroxisome, plastid	23.24	28.01
Os05t0576900-01	Rice	golgi, plasma membrane, vacuole	44.59	27.92
Os01t0643300-01	Rice	golgi, plasma membrane, vacuole	45.14	27.02
Os06t0232300-01	Rice	plasma membrane	42.97	26.86
Os02t0743400-01	Rice	plasma membrane	42.97	26.72
Os06t0660200-01	Rice	plasma membrane	43.24	25.4
Os09t0505400-00	Rice	mitochondrion, nucleus, peroxisome	27.57	24.64

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	EntrezGene:4346116	EMBL:AK100297	InterPro:Auxin_eff_plant	ProteinID:BAD09105.1
ProteinID:BAF24231.1	ProteinID:BAT06374.1	ProteinID:FAA00685.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009926
GO:GO:0009987	GO:GO:0010252	GO:GO:0010315	GO:GO:0010329	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:Mem_trans	EnsemblPlantsGene:Os08g0529000	EnsemblPlants:Os08t0529000-01	PFAM:PF03547	PANTHER:PTHR31752
PANTHER:PTHR31752:SF11	UniProt:Q6ZIB5	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI000023AD11	RefSeq:XP_015649102.1
SEG:seg	:	:	:	:	:

Description

PIN PROTEIN 5BAuxin efflux carrier, Auxin homeostasis, transport and distribution (Os08t0529000-01)

Coordinates

chr8:-:26331939..26335725

Molecular Weight (calculated)

39034.3 Da

IEP (calculated)

9.502

GRAVY (calculated)

0.754

Length

370 amino acids

Sequence
(BLAST)

001: MIGWGDVYKV VGAMAPLYFA LGLGYGSVRW WRFFTAEQCA AINTMVVYFS MPFFTFDFVV RTDPFAMNYR VIAADAVSKA IAIAAMAAWA RTRCGCAAAK
101: AGAQSWSITG FSLAALNNTL VVGVPLLDAM YGRWAQDLVV QIAVVQSMVW FPLLLMAFEL RKAWVVGGGG GVGPAVMSSS SPPEKQSDVE MNGAVVAAPG
201: GGGGVRLPFW ATARTVGLKL ARNPNVYASV LGVVWACIAY RWHLSLPGIV TGSLQVMSRT GTGMSMFSMG LFMGQQERVI ACGAGLTALG MALRFVAGPL
301: ATLVGAAALG LRGDVLHLAI IQAALPQSIA SFVFAKEYGL HADVLSTAVI FGTLISLPIL IAYYAVLGFV

Best Arabidopsis Sequence Match ( AT5G16530.1 )
(BLAST)

001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H

Arabidopsis Description

PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.