Factsheet for Zm00001d052442_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09211	Sorghum	golgi, plasma membrane	89.53	87.99
Os12t0133800-01	Rice	peroxisome, plastid	44.68	83.39
TraesCS4B01G130100.1	Wheat	plasma membrane	81.68	82.69
TraesCS4D01G125300.1	Wheat	plasma membrane	81.5	82.51
TraesCS4A01G188100.1	Wheat	plasma membrane	81.5	82.22
Os11t0137000-01	Rice	golgi, plasma membrane	79.41	82.13
GSMUA_Achr8P09440_001	Banana	plasma membrane	64.57	67.77
GSMUA_Achr2P00910_001	Banana	golgi, plasma membrane, vacuole	65.1	66.97
KRH66749	Soybean	plasma membrane	67.02	64.32
Solyc10g078370.1.1	Tomato	golgi, plasma membrane	65.44	63.13
PGSC0003DMT400021600	Potato	golgi, plasma membrane	65.44	63.13
PGSC0003DMT400072459	Potato	golgi, plasma membrane	64.4	62.86
Solyc10g080880.1.1	Tomato	golgi, plasma membrane	64.05	62.63
HORVU4Hr1G026680.4	Barley	plastid	81.33	59.67
Zm00001d018024_P001	Maize	plasma membrane	61.78	59.5
Zm00001d052269_P001	Maize	plasma membrane	61.78	59.3
KRG95082	Soybean	plasma membrane	49.74	59.25
Zm00001d044812_P001	Maize	plasma membrane	61.95	59.07
Zm00001d044083_P001	Maize	plasma membrane	60.38	56.72
Zm00001d046893_P001	Maize	golgi, plasma membrane, vacuole	58.64	52.83
Zm00001d045219_P001	Maize	plasma membrane	52.53	51.81
Zm00001d043660_P001	Maize	plasma membrane	31.94	50.55
Zm00001d042345_P001	Maize	plasma membrane	29.14	43.72
Zm00001d006082_P001	Maize	extracellular, plasma membrane, vacuole	27.4	43.01
VIT_04s0023g00330.t01	Wine grape	extracellular, golgi	5.76	39.29
Zm00001d043179_P001	Maize	plasma membrane	28.8	36.91
Zm00001d031594_P001	Maize	plasma membrane	25.31	33.18

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	ProteinID:AQK57225.1	InterPro:Auxin_eff_plant	GO:GO:0005575	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:K7V280	InterPro:Mem_trans	PFAM:PF03547
PANTHER:PTHR31752	PANTHER:PTHR31752:SF14	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI0000034BBF	EnsemblPlantsGene:Zm00001d052442
EnsemblPlants:Zm00001d052442_P001	EnsemblPlants:Zm00001d052442_T001	SEG:seg	:	:	:

Description

PIN-formed protein4 PIN-formed protein4

Coordinates

chr4:-:190119181..190122383

Molecular Weight (calculated)

60234.0 Da

IEP (calculated)

9.228

GRAVY (calculated)

0.317

Length

573 amino acids

Sequence
(BLAST)

001: MITALDLYHV LTAVVPLYVA MTLAYGSVRW WRIFTPDQCS GINRFVALFA VPLLSFHFIS TNDPFAMNLR FLAADTLQKV AVLALLALAS RGLSSPRALG
101: LDWSITLFSL STLPNTLVMG IPLLRGMYGA SSAGTLMVQV VVLQCIIWYT LMLFLFEYRA ARALVLDQFP DGAAASIVSF RVDSDVVSLA RGDVELEAEP
201: DGVAGAGAVS SRGGDAGRVR VTVRKSTSSR SEAACSHSHS QTMQPRVSNL SGVEIYSLQS SRNPTPRGSS FNHADFFNIV GAAAKGGGGA AGDEEKGACG
301: GGGGGHSPQP QAVAVPAKRK DLHMLVWSSS ASPVSERAAV HVFGAGGADH ADVLAKGAQA YDEYGRDDYS SRTKNGSGGA DKGGPTLSKL GSNSTAQLYP
401: KDDGEGRAAA VAMPPASVMT RLILIMVWRK LIRNPNTYSS LIGVVWSLVS YRWGIEMPAI IARSISILSD AGLGMAMFSL GLFMALQPRI IACGNKLAAI
501: AMGVRFVAGP AVMAAASIAV GLRGVLLHIA IVQAALPQGI VPFVFAKEYG VHPDILSTAY GPITSHGFIT CHS

Best Arabidopsis Sequence Match ( AT1G23080.3 )
(BLAST)

001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGLFMA LQPKLIACGN STATFAMAVR FFTGPAVMAV AAMAIGLRGD LLRVAIVQAA LPQGIVPFVF AKEYNVHPAI LSTGVIFGML
601: IALPITLVYY ILLGL

Arabidopsis Description

PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.