Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018024_P001 | Maize | plasma membrane | 88.78 | 89.08 |
| EES05538 | Sorghum | golgi, plasma membrane | 89.45 | 88.26 |
| Os02t0743400-01 | Rice | plasma membrane | 86.93 | 87.23 |
| TraesCS6A01G308600.1 | Wheat | plasma membrane | 85.09 | 86.39 |
| TraesCS6D01G287800.1 | Wheat | plasma membrane | 85.09 | 86.25 |
| Zm00001d044812_P001 | Maize | plasma membrane | 82.41 | 81.86 |
| HORVU6Hr1G076110.2 | Barley | plasma membrane | 79.56 | 79.03 |
| GSMUA_Achr7P07300_001 | Banana | golgi, plasma membrane | 73.03 | 76.63 |
| GSMUA_Achr9P27160_001 | Banana | plasma membrane | 68.01 | 73.68 |
| TraesCS6B01G337300.3 | Wheat | plasma membrane | 63.15 | 63.36 |
| Zm00001d052442_P001 | Maize | plasma membrane | 59.3 | 61.78 |
| Zm00001d044083_P001 | Maize | plasma membrane | 61.98 | 60.66 |
| Zm00001d045219_P001 | Maize | plasma membrane | 55.61 | 57.14 |
| Zm00001d046893_P001 | Maize | golgi, plasma membrane, vacuole | 59.13 | 55.5 |
| Zm00001d043660_P001 | Maize | plasma membrane | 32.16 | 53.04 |
| Zm00001d006082_P001 | Maize | extracellular, plasma membrane, vacuole | 27.3 | 44.66 |
| Zm00001d042345_P001 | Maize | plasma membrane | 28.14 | 43.98 |
| Zm00001d043179_P001 | Maize | plasma membrane | 31.49 | 42.06 |
| Zm00001d031594_P001 | Maize | plasma membrane | 25.29 | 34.55 |
Protein Annotations
| EntrezGene:103654258 | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | ProteinID:ACB55418.1 | ProteinID:AQK56581.1 | InterPro:Auxin_eff_plant |
| UniProt:B2D1S1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF19 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix |
| UniParc:UPI000172CBA6 | EnsemblPlantsGene:Zm00001d052269 | EnsemblPlants:Zm00001d052269_P001 | EnsemblPlants:Zm00001d052269_T001 | SEG:seg | : |
Description
PIN-formed protein3Putative auxin efflux carrier
Coordinates
chr4:+:185371637..185375098
Molecular Weight (calculated)
64653.2 Da
IEP (calculated)
8.299
GRAVY (calculated)
0.239
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MISAADLYHV MTAVVPLYVA MILAYGSVRW WRIFSPDQCS GINRFVALFA VPLLSFHFIS TNNPYTMNLR FIAADTLQKL MVLAMLTAWG HLSRRGRGSL
101: DLDWTITLFS LSTLPNTLVM GIPLLRGMYG DFSGSLMVQI VVLQCIIWYT LMLFMFEYRA ARLLIAEQFP GNAAGAIASI AVDPDVVSLV DHGRGDAIET
201: EAEVREDGRI HVTVRRSSAS RSDVVYSRRS VGGFSGATPR PSNLTNAEIY SLQSSRNPTP RGSSFNHTDF YSMVGRSSNF GAADAFGAVR TGAGTTPRPS
301: NYEDDASRPK YPLPVVSAAP GVAGHYPAPW SARKAATNGH AKGEDLHMFV WSSSASPVSD FFGGGAPDYN DHAAAAKSPR KMDGGARDRD DYVERDEFSF
401: GNRGAMEDRD AEDPAAAGGD PNAVAAATAM PPTSVMTRLI LIMVWRKLIR NPNTYSSLIG VVWSLVCFRW NFQMPDIVLH SISILSDAGL GMAMFSLGLF
501: MALQPRIIAC GNKVATFAMA VRFLTGPAVM AAASFAVGLR GTLLHVAIVQ AALPQGIVPF VFAKEYSVHP DILSTAVIFG MLIALPITLV YYILLGL
101: DLDWTITLFS LSTLPNTLVM GIPLLRGMYG DFSGSLMVQI VVLQCIIWYT LMLFMFEYRA ARLLIAEQFP GNAAGAIASI AVDPDVVSLV DHGRGDAIET
201: EAEVREDGRI HVTVRRSSAS RSDVVYSRRS VGGFSGATPR PSNLTNAEIY SLQSSRNPTP RGSSFNHTDF YSMVGRSSNF GAADAFGAVR TGAGTTPRPS
301: NYEDDASRPK YPLPVVSAAP GVAGHYPAPW SARKAATNGH AKGEDLHMFV WSSSASPVSD FFGGGAPDYN DHAAAAKSPR KMDGGARDRD DYVERDEFSF
401: GNRGAMEDRD AEDPAAAGGD PNAVAAATAM PPTSVMTRLI LIMVWRKLIR NPNTYSSLIG VVWSLVCFRW NFQMPDIVLH SISILSDAGL GMAMFSLGLF
501: MALQPRIIAC GNKVATFAMA VRFLTGPAVM AAASFAVGLR GTLLHVAIVQ AALPQGIVPF VFAKEYSVHP DILSTAVIFG MLIALPITLV YYILLGL
001: MITAADFYHV MTAMVPLYVA MILAYGSVKW WKIFTPDQCS GINRFVALFA VPLLSFHFIA ANNPYAMNLR FLAADSLQKV IVLSLLFLWC KLSRNGSLDW
101: TITLFSLSTL PNTLVMGIPL LKGMYGNFSG DLMVQIVVLQ CIIWYTLMLF LFEYRGAKLL ISEQFPDTAG SIVSIHVDSD IMSLDGRQPL ETEAEIKEDG
201: KLHVTVRRSN ASRSDIYSRR SQGLSATPRP SNLTNAEIYS LQSSRNPTPR GSSFNHTDFY SMMASGGGRN SNFGPGEAVF GSKGPTPRPS NYEEDGGPAK
301: PTAAGTAAGA GRFHYQSGGS GGGGGAHYPA PNPGMFSPNT GGGGGTAAKG NAPVVGGKRQ DGNGRDLHMF VWSSSASPVS DVFGGGGGNH HADYSTATND
401: HQKDVKISVP QGNSNDNQYV EREEFSFGNK DDDSKVLATD GGNNISNKTT QAKVMPPTSV MTRLILIMVW RKLIRNPNSY SSLFGITWSL ISFKWNIEMP
501: ALIAKSISIL SDAGLGMAMF SLGLFMALNP RIIACGNRRA AFAAAMRFVV GPAVMLVASY AVGLRGVLLH VAIIQAALPQ GIVPFVFAKE YNVHPDILST
601: AVIFGMLIAL PITLLYYILL GL
101: TITLFSLSTL PNTLVMGIPL LKGMYGNFSG DLMVQIVVLQ CIIWYTLMLF LFEYRGAKLL ISEQFPDTAG SIVSIHVDSD IMSLDGRQPL ETEAEIKEDG
201: KLHVTVRRSN ASRSDIYSRR SQGLSATPRP SNLTNAEIYS LQSSRNPTPR GSSFNHTDFY SMMASGGGRN SNFGPGEAVF GSKGPTPRPS NYEEDGGPAK
301: PTAAGTAAGA GRFHYQSGGS GGGGGAHYPA PNPGMFSPNT GGGGGTAAKG NAPVVGGKRQ DGNGRDLHMF VWSSSASPVS DVFGGGGGNH HADYSTATND
401: HQKDVKISVP QGNSNDNQYV EREEFSFGNK DDDSKVLATD GGNNISNKTT QAKVMPPTSV MTRLILIMVW RKLIRNPNSY SSLFGITWSL ISFKWNIEMP
501: ALIAKSISIL SDAGLGMAMF SLGLFMALNP RIIACGNRRA AFAAAMRFVV GPAVMLVASY AVGLRGVLLH VAIIQAALPQ GIVPFVFAKE YNVHPDILST
601: AVIFGMLIAL PITLLYYILL GL
Arabidopsis Description
PIN1Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178WFG7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.