Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- cytosol 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G26640.1 | EES09373 | AT4G09570.1 | 19130088 |
| AT2G26640.1 | EES16732 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039094_P001 | Maize | cytosol | 93.18 | 93.91 |
| Os05t0574600-01 | Rice | endoplasmic reticulum, peroxisome, plastid | 87.91 | 86.73 |
| HORVU1Hr1G090730.1 | Barley | peroxisome, plasma membrane, plastid | 80.7 | 79.92 |
| TraesCS1A01G413400.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 80.12 | 79.04 |
| TraesCS1D01G420900.1 | Wheat | peroxisome | 79.92 | 79.0 |
| VIT_04s0008g04710.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 76.8 | 77.1 |
| KRH56654 | Soybean | endoplasmic reticulum | 75.44 | 75.88 |
| KRH03757 | Soybean | cytosol, peroxisome, plasma membrane | 75.44 | 75.88 |
| EER88601 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 76.22 | 75.78 |
| Solyc08g067410.1.1 | Tomato | plasma membrane | 74.27 | 75.45 |
| PGSC0003DMT400019029 | Potato | plasma membrane | 74.07 | 75.25 |
| CDX70186 | Canola | plastid | 75.05 | 75.05 |
| Solyc06g065560.1.1 | Tomato | nucleus | 75.05 | 75.05 |
| EES06493 | Sorghum | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 76.41 | 74.81 |
| PGSC0003DMT400067205 | Potato | peroxisome | 74.66 | 74.66 |
| Bra009413.1-P | Field mustard | cytosol, golgi, plasma membrane | 75.05 | 74.47 |
| AT2G26640.1 | Thale cress | plasma membrane | 73.88 | 74.46 |
| CDX98800 | Canola | plastid | 74.85 | 74.13 |
| KRH63016 | Soybean | cytosol, peroxisome, plasma membrane | 73.49 | 73.92 |
| KRH54862 | Soybean | cytosol, peroxisome, plasma membrane | 72.32 | 72.75 |
| Solyc12g006820.1.1 | Tomato | plasma membrane | 69.4 | 71.2 |
| PGSC0003DMT400002734 | Potato | cytosol, peroxisome, plasma membrane | 69.98 | 70.25 |
| EES19964 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 68.23 | 67.31 |
| VIT_11s0016g04700.t01 | Wine grape | plastid | 76.41 | 63.53 |
| KXG28804 | Sorghum | plastid | 63.16 | 62.07 |
| EER92628 | Sorghum | plasma membrane | 59.06 | 61.34 |
| EER91722 | Sorghum | peroxisome | 60.43 | 57.94 |
| EES08876 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 58.09 | 56.02 |
| KXG39781 | Sorghum | peroxisome | 58.09 | 54.28 |
| EER95458 | Sorghum | mitochondrion | 55.75 | 54.06 |
| EER91618 | Sorghum | plastid | 54.58 | 53.44 |
| EER95395 | Sorghum | cytosol, peroxisome, plasma membrane | 55.75 | 52.67 |
| KXG30818 | Sorghum | golgi, mitochondrion | 46.98 | 49.49 |
| KXG19727 | Sorghum | mitochondrion, plastid | 46.59 | 48.48 |
| EER89559 | Sorghum | mitochondrion, plasma membrane | 46.0 | 48.16 |
| EER89567 | Sorghum | endoplasmic reticulum, golgi, plastid | 42.11 | 47.37 |
| OQU76197 | Sorghum | golgi | 42.3 | 45.3 |
| KXG19733 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 42.3 | 45.11 |
| EES03073 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 42.88 | 44.9 |
| EER88189 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 42.11 | 44.81 |
| EES00849 | Sorghum | endoplasmic reticulum, golgi | 43.08 | 44.74 |
| EES19986 | Sorghum | cytosol | 7.41 | 17.19 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | EntrezGene:8083788 |
| InterPro:ACP_syn_III_C | UniProt:C5YW23 | EnsemblPlants:EES19987 | ProteinID:EES19987 | ProteinID:EES19987.1 | InterPro:FAE1_typ3_polyketide_synth |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 |
| PANTHER:PTHR31561 | PANTHER:PTHR31561:SF65 | MetaCyc:PWY-4381 | MetaCyc:PWY-5080 | MetaCyc:PWY-5972 | MetaCyc:PWY-6433 |
| MetaCyc:PWY-6598 | MetaCyc:PWY-7036 | MetaCyc:PWY-7601 | MetaCyc:PWY-7602 | MetaCyc:PWY-7619 | MetaCyc:PWY-7724 |
| MetaCyc:PWY-7725 | EnsemblPlantsGene:SORBI_3009G241000 | SUPFAM:SSF53901 | unigene:Sbi.20551 | TMHMM:TMhelix | InterPro:Thiolase-like |
| UniParc:UPI0001A89341 | RefSeq:XP_002441557.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:57810429..57812688
Molecular Weight (calculated)
57238.6 Da
IEP (calculated)
9.610
GRAVY (calculated)
-0.107
Length
513 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEPRTTAA ATPSSRMPDF KQSVKLKYVK LGYHHLISHG AYLLLAPLPG LVAAHLSTFT LRDLADLWQS LQYNLVSVLV CTTVLVVVAT AYALTRPRPV
101: YLVDFACYKP DDERKCSRAR FMNCTESLGT FTPENIEFQR RIIERSGLGE DTYLPEAVLN IPPNPSMANA RKEAEMVMFG ALDELFAKTG VRPKDVGVLV
201: VNCSLFNPTP SLSAMVVNHY KLRGNIASYN LGGMGCSAGL IAVDLARDLL QCHRDTYAVV ISMENITLNW YFGNDRSMLV SNCLFRMGGA ALLLSNRGSA
301: RRRSKYQLVH TVRTHRAADD RCFGCVWQRE DGEGKVGVSL SKELMAVAGD ALKTNITTLG PLVLPMSEQL LFFATLVARK VLKRKVKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT DWHMEPSRMT LHRFGNTSSS SLWYELAYAE AKGRIKKGDR TWQIAFGSGF KCNSAVWKAL RSVNPAKEKG MRNNPWRDDI
501: DRYPVAVPKV SAI
101: YLVDFACYKP DDERKCSRAR FMNCTESLGT FTPENIEFQR RIIERSGLGE DTYLPEAVLN IPPNPSMANA RKEAEMVMFG ALDELFAKTG VRPKDVGVLV
201: VNCSLFNPTP SLSAMVVNHY KLRGNIASYN LGGMGCSAGL IAVDLARDLL QCHRDTYAVV ISMENITLNW YFGNDRSMLV SNCLFRMGGA ALLLSNRGSA
301: RRRSKYQLVH TVRTHRAADD RCFGCVWQRE DGEGKVGVSL SKELMAVAGD ALKTNITTLG PLVLPMSEQL LFFATLVARK VLKRKVKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT DWHMEPSRMT LHRFGNTSSS SLWYELAYAE AKGRIKKGDR TWQIAFGSGF KCNSAVWKAL RSVNPAKEKG MRNNPWRDDI
501: DRYPVAVPKV SAI
001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI
Arabidopsis Description
KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.