CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 3
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028241_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	98.18	98.18
Zm00001d048061_P001	Maize	golgi	93.52	93.52
Os03t0220100-01	Rice	golgi, mitochondrion	93.32	93.32
TraesCS4D01G242200.1	Wheat	mitochondrion, plasma membrane	91.09	90.73
TraesCS4A01G065300.1	Wheat	mitochondrion, plasma membrane	90.08	89.72
HORVU4Hr1G067340.2	Barley	golgi	90.69	89.42
GSMUA_Achr3P02180_001	Banana	plasma membrane	59.92	83.85
GSMUA_Achr2P21590_001	Banana	golgi, peroxisome, plastid	64.98	83.16
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi, plasma membrane	73.08	81.49
KRH35956	Soybean	plasma membrane	79.96	79.64
VIT_14s0006g02990.t01	Wine grape	plasma membrane	78.74	79.06
KRG90814	Soybean	cytosol, golgi, plasma membrane	78.95	78.63
PGSC0003DMT400032993	Potato	plasma membrane	77.94	77.62
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	77.73	77.42
Bra004034.1-P	Field mustard	plasma membrane	76.92	77.24
Solyc02g085870.2.1	Tomato	plasma membrane	77.53	77.22
AT1G68530.1	Thale cress	plasma membrane	77.53	77.06
CDY04232	Canola	plasma membrane	77.33	76.86
CDY07381	Canola	plasma membrane	77.13	76.66
GSMUA_Achr8P30930_001	Banana	endoplasmic reticulum, extracellular	59.72	76.42
Bra024749.1-P	Field mustard	plasma membrane	76.32	75.86
CDY42109	Canola	plasma membrane	76.11	75.65
AT1G25450.1	Thale cress	plasma membrane	75.3	75.61
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	75.71	75.4
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	75.71	75.4
Solyc02g063140.2.1	Tomato	golgi	75.1	74.8
PGSC0003DMT400037757	Potato	plastid	67.0	71.8
PGSC0003DMT400037714	Potato	plasma membrane	70.45	70.45
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	69.23	69.23
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	68.22	68.5
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	70.04	66.67
EES19964	Sorghum	endoplasmic reticulum, plasma membrane, plastid	66.4	63.08
KXG30818	Sorghum	golgi, mitochondrion	62.15	63.04
EES06493	Sorghum	endoplasmic reticulum, peroxisome, plasma membrane, plastid	64.37	60.69
KXG19727	Sorghum	mitochondrion, plastid	60.53	60.65
EER88601	Sorghum	endoplasmic reticulum, plasma membrane, plastid	62.96	60.27
EES19987	Sorghum	cytosol, endoplasmic reticulum, plastid	61.34	59.06
EER89559	Sorghum	mitochondrion, plasma membrane	57.89	58.37
KXG19733	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	54.86	56.34
KXG28804	Sorghum	plastid	55.47	52.49
EES03073	Sorghum	endoplasmic reticulum, golgi, plasma membrane	51.82	52.24
EER88189	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	50.81	52.07
OQU76197	Sorghum	golgi	50.4	51.98
EER89567	Sorghum	endoplasmic reticulum, golgi, plastid	47.57	51.54
EES00849	Sorghum	endoplasmic reticulum, golgi	51.42	51.42
EES08876	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	54.86	50.94
EER91722	Sorghum	peroxisome	55.06	50.84
EER95395	Sorghum	cytosol, peroxisome, plasma membrane	54.45	49.54
EER95458	Sorghum	mitochondrion	52.43	48.96
KXG39781	Sorghum	peroxisome	53.85	48.45
EER91618	Sorghum	plastid	49.6	46.76
EES19986	Sorghum	cytosol	7.49	16.74

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	EntrezGene:8085289
InterPro:ACP_syn_III_C	UniProt:C5WSP8	EnsemblPlants:EER92628	ProteinID:EER92628	ProteinID:EER92628.1	InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417
PANTHER:PTHR31561	PANTHER:PTHR31561:SF5	MetaCyc:PWY-4381	MetaCyc:PWY-5080	MetaCyc:PWY-5972	MetaCyc:PWY-6433
MetaCyc:PWY-6598	MetaCyc:PWY-7036	MetaCyc:PWY-7601	MetaCyc:PWY-7602	MetaCyc:PWY-7619	MetaCyc:PWY-7724
MetaCyc:PWY-7725	EnsemblPlantsGene:SORBI_3001G453200	SUPFAM:SSF53901	unigene:Sbi.14723	TMHMM:TMhelix	InterPro:Thiolase-like
UniParc:UPI0001A82808	RefSeq:XP_002465630.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:72974636..72977039

Molecular Weight (calculated)

55615.0 Da

IEP (calculated)

9.562

GRAVY (calculated)

-0.001

Length

494 amino acids

Sequence
(BLAST)

001: MPTGGVFSGS VNLKYVKLGY QYLVNHFLTL LLVPVMAATA LELARLGPGE LLSLWRSLEL DLVHILCSVF LVVFIGTVYV MSRPRPVYLV DYACYKPPAS
101: CRVPFATFME HTRLISDDDK SVRFQTRILE RSGLGEDTCL PPANHYIPPN PSMEASRAEA QLVIFSAIDD LVRRTGLKPK DIDILVVNCS LFSPTPSLSA
201: MIINKYKLRS NIRSFNLSGM GCSAGLISID LARDMLQVHP NSNALVVSTE IITPNFYQGS RRDMLLPNCL FRMGAAAILL SNRRREARRA KYRLVHVVRT
301: HKGADDRAYR CVYQEEDDQG FSGISLSKEL MAIAGDALKS NITTIGPLVL PMSEQLLFFF RLVGRKLFNK AWKPYIPDFK LAFEHFCIHA GGRAVIDELQ
401: KNLQLSPRHV EASRMTLHRF GNTSSSSLWY ELAYIEAKGR MRRGDRVWQI GFGSGFKCNS AVWKCLRSIK TPTNGPWDDC IHRYPVDVPE VVKL

Best Arabidopsis Sequence Match ( AT1G68530.1 )
(BLAST)

001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL

Arabidopsis Description

CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.