Factsheet for VIT_19s0093g00440.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 3
cytosol 1
extracellular 2
vacuole 2
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0006g02990.t01	Wine grape	plasma membrane	79.27	79.27
Solyc02g085870.2.1	Tomato	plasma membrane	75.61	75.0
PGSC0003DMT400032993	Potato	plasma membrane	75.41	74.8
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	74.8	74.19
Solyc02g063140.2.1	Tomato	golgi	73.98	73.39
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	73.98	73.39
GSMUA_Achr2P21590_001	Banana	golgi, peroxisome, plastid	54.27	69.17
Os03t0220100-01	Rice	golgi, mitochondrion	68.9	68.62
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi, plasma membrane	61.59	68.4
EER92628	Sorghum	plasma membrane	68.5	68.22
Zm00001d028241_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	68.29	68.02
GSMUA_Achr3P02180_001	Banana	plasma membrane	48.37	67.42
HORVU4Hr1G067340.2	Barley	golgi	68.5	67.27
TraesCS4A01G065300.1	Wheat	mitochondrion, plasma membrane	67.68	67.14
TraesCS4D01G242200.1	Wheat	mitochondrion, plasma membrane	67.48	66.94
Zm00001d048061_P001	Maize	golgi	66.87	66.6
GSMUA_Achr3P07400_001	Banana	plasma membrane	51.42	65.04
Zm00001d045660_P001	Maize	mitochondrion	37.6	63.57
GSMUA_Achr8P30930_001	Banana	endoplasmic reticulum, extracellular	48.98	62.44
Zm00001d037328_P001	Maize	cytosol	46.34	62.13
GSMUA_Achr5P05870_001	Banana	plasma membrane	50.61	59.29
VIT_03s0063g02640.t01	Wine grape	plasma membrane	58.94	57.54
VIT_18s0001g12550.t01	Wine grape	cytosol, peroxisome, plasma membrane	58.13	56.19
KXG30818	Sorghum	golgi, mitochondrion	55.08	55.65
TraesCS1B01G421100.1	Wheat	golgi	52.44	55.6
TraesCS1D01G401000.1	Wheat	plasma membrane	52.44	55.6
Zm00001d051787_P001	Maize	mitochondrion	54.67	55.46
VIT_04s0008g04710.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	57.11	54.99
TraesCS7A01G032900.1	Wheat	cytosol	38.62	54.91
VIT_05s0020g04540.t01	Wine grape	plasma membrane	58.13	54.89
TraesCS1A01G392800.1	Wheat	plasma membrane	51.83	54.84
HORVU6Hr1G073300.1	Barley	golgi, plasma membrane	53.86	54.75
TraesCS6D01G274600.1	Wheat	golgi, plasma membrane	53.86	54.75
TraesCS4D01G008100.1	Wheat	plasma membrane	47.56	54.67
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	51.02	54.57
Os02t0731900-01	Rice	plasma membrane	55.49	54.49
TraesCS6B01G324200.1	Wheat	plasma membrane	53.46	54.34
Zm00001d017941_P001	Maize	plasma membrane	54.27	54.16
TraesCS6A01G293700.1	Wheat	golgi, plasma membrane	53.25	54.13
TraesCS7D01G035700.1	Wheat	plasma membrane	53.05	53.81
TraesCS7A01G205700.1	Wheat	golgi	53.66	53.77
KXG19727	Sorghum	mitochondrion, plastid	53.86	53.75
TraesCS7D01G208600.1	Wheat	cytosol	41.67	53.66
TraesCS7D01G208500.1	Wheat	golgi	53.86	53.64
TraesCS7B01G113000.1	Wheat	golgi	53.46	53.56
TraesCS4B01G274700.1	Wheat	plastid	52.03	53.44
Os06t0262800-01	Rice	plasma membrane	53.25	53.04
TraesCS4D01G273400.1	Wheat	endoplasmic reticulum	52.03	53.0
TraesCS4A01G303900.1	Wheat	plasma membrane	52.85	52.85
TraesCSU01G166100.1	Wheat	plasma membrane	52.85	52.85
TraesCS4A01G031500.1	Wheat	plasma membrane	51.63	52.59
HORVU7Hr1G006910.1	Barley	plasma membrane	52.03	52.57
TraesCS7D01G209400.1	Wheat	cytosol	39.84	52.41
TraesCS7D01G519300.1	Wheat	golgi, plasma membrane	50.81	52.3
TraesCS7A01G532300.1	Wheat	golgi	50.81	52.19
TraesCS7D01G519400.1	Wheat	plasma membrane	50.81	52.19
TraesCS7D01G102300.1	Wheat	mitochondrion	30.69	52.07
HORVU7Hr1G023540.1	Barley	mitochondrion	29.88	51.58
VIT_15s0048g02720.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.49	51.51
EER89559	Sorghum	mitochondrion, plasma membrane	51.22	51.43
TraesCS2D01G508000.1	Wheat	mitochondrion	32.93	50.94
TraesCS1A01G040900.1	Wheat	golgi	49.39	50.84
TraesCS1D01G042300.1	Wheat	golgi	49.39	50.84
TraesCS7B01G449300.1	Wheat	plasma membrane	49.39	50.84
TraesCS7B01G449000.1	Wheat	golgi	50.2	50.72
KXG19733	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	49.39	50.52
EER89567	Sorghum	endoplasmic reticulum, golgi, plastid	46.75	50.44
TraesCS3A01G451100.1	Wheat	plasma membrane	50.0	50.31
TraesCS7A01G108300.1	Wheat	plasma membrane	45.73	50.22
VIT_10s0042g01230.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	45.73	50.22
TraesCS3D01G444000.1	Wheat	golgi	49.8	50.1
TraesCS1A01G037600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	49.59	50.0
TraesCS1D01G039200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	49.39	50.0
HORVU1Hr1G086760.1	Barley	cytosol	51.22	49.9
HORVU3Hr1G097570.1	Barley	golgi	49.59	49.9
TraesCS7D01G029500.1	Wheat	plasma membrane	46.14	49.67
TraesCS6A01G341400.1	Wheat	golgi	50.61	49.5
TraesCS1B01G053700.1	Wheat	endoplasmic reticulum	50.0	49.5
VIT_12s0034g01840.t01	Wine grape	endoplasmic reticulum, golgi	46.14	49.46
TraesCS3B01G488500.1	Wheat	plasma membrane	49.19	49.39
TraesCS1B01G048000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	48.98	49.39
TraesCS7D01G208800.1	Wheat	endoplasmic reticulum	48.37	49.07
TraesCS7A01G205800.1	Wheat	endoplasmic reticulum, golgi, vacuole	44.72	48.89
TraesCS7A01G206000.1	Wheat	golgi	48.98	48.88
OQU76197	Sorghum	golgi	47.56	48.85
TraesCS7D01G089200.1	Wheat	endoplasmic reticulum, plasma membrane	46.95	48.84
HORVU6Hr1G094160.2	Barley	endoplasmic reticulum, golgi, plasma membrane	48.58	48.78
HORVU7Hr1G042040.1	Barley	golgi	48.98	48.59
EES03073	Sorghum	endoplasmic reticulum, golgi, plasma membrane	48.37	48.57
Zm00001d009354_P001	Maize	endoplasmic reticulum	47.97	48.56
Os01t0529800-01	Rice	plasma membrane	47.15	48.54
TraesCS6D01G321600.1	Wheat	golgi	49.59	48.51
TraesCS7B01G113100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	44.31	48.44
TraesCS7B01G113200.1	Wheat	golgi	48.78	48.29
HORVU7Hr1G042050.1	Barley	golgi	47.76	48.25
TraesCS7D01G102900.1	Wheat	golgi, plasma membrane, plastid	46.95	48.12
TraesCS6B01G372900.1	Wheat	golgi	49.19	48.11
HORVU6Hr1G004830.1	Barley	golgi	48.37	47.98
VIT_04s0008g02250.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	51.63	47.92
TraesCS4A01G456600.1	Wheat	plasma membrane	44.11	47.9
TraesCS3D01G279300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	47.36	47.84
VIT_07s0141g00090.t01	Wine grape	cytosol	41.67	47.79
TraesCS6B01G036000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	47.36	47.75
TraesCS6B01G373000.1	Wheat	endoplasmic reticulum, golgi	40.45	47.72
TraesCS7D01G102800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	43.5	47.66
HORVU6Hr1G082270.1	Barley	golgi	49.59	47.66
TraesCS7D01G208700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	44.72	47.62
TraesCS3A01G279400.1	Wheat	plasma membrane	47.15	47.44
Zm00001d044580_P001	Maize	mitochondrion	46.95	47.43
TraesCS2B01G535600.1	Wheat	golgi, mitochondrion	46.75	47.42
EES00849	Sorghum	endoplasmic reticulum, golgi	47.56	47.37
HORVU7Hr1G023280.1	Barley	plasma membrane	43.5	47.35
TraesCS7A01G108000.1	Wheat	golgi, plasma membrane, plastid	45.94	47.08
TraesCS2D01G508300.1	Wheat	endoplasmic reticulum, plasma membrane	44.11	47.07
TraesCS2B01G535700.1	Wheat	endoplasmic reticulum, plasma membrane	43.7	46.94
TraesCS6A01G025200.1	Wheat	plasma membrane	46.34	46.82
TraesCS7B01G006100.1	Wheat	mitochondrion	46.34	46.82
TraesCS7B01G006300.1	Wheat	golgi	46.34	46.82
TraesCS2A01G507700.1	Wheat	golgi, plasma membrane	43.5	46.72
TraesCS2D01G508200.1	Wheat	plasma membrane, plastid	43.29	46.51
TraesCS7D01G102400.1	Wheat	endoplasmic reticulum, plastid, vacuole	45.33	46.46
TraesCS3B01G313800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	47.76	46.44
TraesCS2A01G014600.1	Wheat	plasma membrane	46.75	46.37
VIT_11s0016g04700.t01	Wine grape	plastid	58.13	46.35
EER88189	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	45.33	46.27
TraesCS6A01G024400.1	Wheat	plasma membrane	45.94	46.22
HORVU2Hr1G112840.1	Barley	endoplasmic reticulum, golgi	43.9	46.15
TraesCS7A01G107900.1	Wheat	golgi, mitochondrion	44.72	46.12
TraesCS5A01G076500.1	Wheat	golgi	45.73	45.82
TraesCS5D01G089800.1	Wheat	golgi	45.53	45.81
Zm00001d044579_P001	Maize	golgi	45.94	45.75
HORVU7Hr1G022720.1	Barley	plasma membrane	33.33	45.68
Os06t0260500-00	Rice	mitochondrion	48.78	45.54
TraesCS7A01G107700.1	Wheat	mitochondrion, plastid	45.94	45.47
TraesCS7D01G102000.1	Wheat	mitochondrion, plastid	45.94	45.47
VIT_07s0141g00070.t01	Wine grape	cytosol	36.79	45.25
VIT_07s0141g00030.t01	Wine grape	endoplasmic reticulum, extracellular	40.24	44.7
VIT_09s0070g00300.t01	Wine grape	cytosol, peroxisome, plasma membrane	45.94	44.66
HORVU7Hr1G022780.1	Barley	golgi, mitochondrion	42.48	44.09
TraesCS4D01G008200.1	Wheat	plasma membrane	43.9	43.9
HORVU7Hr1G022580.1	Barley	golgi, mitochondrion	32.52	43.84
HORVU7Hr1G030880.1	Barley	plasma membrane	44.31	43.69
HORVU5Hr1G087530.1	Barley	plasma membrane	42.68	43.21
TraesCS1A01G439000.1	Wheat	plasma membrane	43.9	43.2
VIT_07s0141g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	40.85	43.13
HORVU5Hr1G122360.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	43.09	42.91
TraesCS7A01G532200.1	Wheat	cytosol	8.94	42.31
HORVU3Hr1G069880.2	Barley	mitochondrion, plastid	45.94	42.16
TraesCS5D01G017000.1	Wheat	endoplasmic reticulum, golgi, plastid	40.24	41.95

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	EntrezGene:100248107	wikigene:100248107	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10
MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C	EMBL:AM457238	ProteinID:CAN63425	ProteinID:CAN63425.1	ProteinID:CCB57194
ProteinID:CCB57194.1	UniProt:F6HR86	InterPro:FAE1_typ3_polyketide_synth	EMBL:FN596009	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
InterPro:IPR016039	EntrezGene:LOC100248107	wikigene:LOC100248107	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417
PANTHER:PTHR31561	PANTHER:PTHR31561:SF5	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI00015CCD94
ArrayExpress:VIT_19s0093g00440	EnsemblPlantsGene:VIT_19s0093g00440	EnsemblPlants:VIT_19s0093g00440.t01	RefSeq:XP_002271250	RefSeq:XP_002271250.1	SEG:seg

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6HR86]

Coordinates

chr19:-:17406699..17408183

Molecular Weight (calculated)

55078.5 Da

IEP (calculated)

9.485

GRAVY (calculated)

0.037

Length

492 amino acids

Sequence
(BLAST)

001: MASLSNSVKL KYIKLGYQYL VNHILTFFLI PILMGFLIKI LSLGPDQIYE IGSSLHFDLL QFLGSSLMII FLATVYFMSK PRSVYLVDYA CFKPPASYRV
101: PHATLVKHLR LSNKDNPEIV EFQRRILQRS GLGDETCLAP ANLYIPPTPS LEASRAEAEL ILFSVIDDLL KKTGTKTKDI DILIVNCSIV SPTPSLSAMV
201: INKYKLRSNI KSFNLSGMGC SASLISIDLA RELLQVHPNS CAIVVSTEIT TPNYYSGNER SMVLINCLFR MGGAAILLSN KKADRSRSKY QLLHLVRTHK
301: GADDKAYRCI HEQEDTQGIQ GVSLSKDLML IAGEALKSNI TTIGPLVLPA SEQLNFLFTL IGQKILKLKW KPYIPDFKQA FEHFCIHAGG RGVIDELQKK
401: LQLSAKDVEA SRMTLHRFGN TSSSSIWYEM NYIESKGRMK KGDRIWQIAF GSGFKCNSAV WKCNRTITTP TDGPWLDCIG RYPVSISQVL DL

Best Arabidopsis Sequence Match ( AT1G68530.1 )
(BLAST)

001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL

Arabidopsis Description

CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.