Factsheet for TraesCS7B01G006100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G006300.1	Wheat	golgi	83.98	83.98
TraesCS7D01G102000.1	Wheat	mitochondrion, plastid	83.57	81.89
TraesCS7A01G107700.1	Wheat	mitochondrion, plastid	83.16	81.49
HORVU7Hr1G022580.1	Barley	golgi, mitochondrion	59.14	78.9
TraesCS2B01G535600.1	Wheat	golgi, mitochondrion	72.9	73.2
TraesCS2B01G535700.1	Wheat	endoplasmic reticulum, plasma membrane	68.79	73.14
TraesCS1B01G421100.1	Wheat	golgi	55.03	57.76
TraesCS4B01G274700.1	Wheat	plastid	55.44	56.37
TraesCS6B01G324200.1	Wheat	plasma membrane	55.65	55.99
TraesCS7B01G113100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	49.49	53.56
TraesCS3B01G488500.1	Wheat	plasma membrane	53.18	52.86
TraesCS7B01G449300.1	Wheat	plasma membrane	51.54	52.51
TraesCS7B01G449000.1	Wheat	golgi	52.16	52.16
TraesCS7B01G113000.1	Wheat	golgi	52.57	52.14
TraesCS6B01G036000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	51.33	51.23
TraesCS6B01G373000.1	Wheat	endoplasmic reticulum, golgi	43.53	50.84
TraesCS1B01G048000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	49.69	49.59
TraesCS6B01G372900.1	Wheat	golgi	50.72	49.11
TraesCS3B01G313800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	50.92	49.01
VIT_14s0006g02990.t01	Wine grape	plasma membrane	48.87	48.37
TraesCS1B01G053700.1	Wheat	endoplasmic reticulum	49.28	48.29
TraesCS7B01G113200.1	Wheat	golgi	49.28	48.29
KRH35956	Soybean	plasma membrane	48.87	47.98
PGSC0003DMT400037757	Potato	plastid	45.38	47.94
KRG90814	Soybean	cytosol, golgi, plasma membrane	48.46	47.58
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	47.43	46.57
PGSC0003DMT400037714	Potato	plasma membrane	47.23	46.56
PGSC0003DMT400032993	Potato	plasma membrane	47.23	46.37
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	46.82	46.34
GSMUA_Achr3P07400_001	Banana	plasma membrane	36.96	46.27
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	47.02	46.17
Solyc02g085870.2.1	Tomato	plasma membrane	46.82	45.97
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	46.61	45.95
CDY42109	Canola	plasma membrane	46.61	45.67
Bra024749.1-P	Field mustard	plasma membrane	46.61	45.67
AT1G25450.1	Thale cress	plasma membrane	45.59	45.12
GSMUA_Achr5P05870_001	Banana	plasma membrane	38.81	45.0
Bra004034.1-P	Field mustard	plasma membrane	45.38	44.92
CDY04232	Canola	plasma membrane	45.79	44.87
Solyc02g063140.2.1	Tomato	golgi	45.59	44.76
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	45.59	44.76
CDY07381	Canola	plasma membrane	45.59	44.67
AT1G68530.1	Thale cress	plasma membrane	45.17	44.27
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	46.0	43.16
TraesCS6B01G098300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	44.56	42.3
TraesCS1B01G436300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	45.59	42.29
TraesCS4B01G278800.1	Wheat	golgi	42.09	40.2
TraesCS7B01G254900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	42.71	39.92
TraesCS1B01G387800.2	Wheat	plasma membrane	40.86	39.72
TraesCS6B01G207000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	42.3	39.31
TraesCS6B01G473900.1	Wheat	mitochondrion	40.45	39.09
TraesCS4B01G225500.1	Wheat	peroxisome	42.92	38.28
TraesCS4B01G297500.1	Wheat	golgi	39.43	35.56
TraesCS1B01G443100.1	Wheat	cytosol	5.75	12.67

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF18	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS7B01G006100	EnsemblPlants:TraesCS7B01G006100.1
TIGR:cd00831	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:3341061..3342524

Molecular Weight (calculated)

53885.0 Da

IEP (calculated)

9.557

GRAVY (calculated)

0.180

Length

487 amino acids

Sequence
(BLAST)

001: MGLLSHLKSL VFLYHRAAST FLLRIVTTLT LAPGVLKRVA PWLPASLETM PQLSAIYPIH LLLAVVLPIV AATIYLALRR RTVYLVDYAC FRPSSNLRIP
101: KAAFLEHAHV SPLFDNSTVN FIATVLERSG MSDETHVPHA HHYIEPHCGL DEGRAEAELV VFSVMDDLFA KTCINHGTIG ALITNCSTFS PVPSMADMIV
201: NRYKLRGDLR VINLSGMACS ASVTAVGLAS NMLQVMPWGS HVLVVSTETI GPFYYAGNKR SMQLVNVLFR IGGAAKLLST SKSKARFRLG HFTRTITAAN
301: NAAYRCVYQE EDDKGNLGIA LSKDLMDVAG NALKENIMTT GPLVLPASEL LKFLFFYVAK KVLRWWKIRP YIPNFCVAFE HFCIHVGGPA VITSVQRGLN
401: LSDKHVEPSK MTLHRFGNQS TSSVWYELSY IEAKGRMKKG NRVWMIGFGA GYECNTVGWV CIQPSSRMDG PWASCIHRYP VDVSKSG

Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)

001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY

Arabidopsis Description

KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.