Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G321600.1 | Wheat | golgi | 94.43 | 94.43 |
| TraesCS6A01G341400.1 | Wheat | golgi | 93.64 | 93.64 |
| HORVU6Hr1G082270.1 | Barley | golgi | 87.28 | 85.74 |
| TraesCS3B01G488500.1 | Wheat | plasma membrane | 75.94 | 77.96 |
| KXG19733 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 61.43 | 64.24 |
| TraesCS1B01G421100.1 | Wheat | golgi | 57.85 | 62.72 |
| EER88189 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 60.04 | 62.66 |
| TraesCS4B01G274700.1 | Wheat | plastid | 59.44 | 62.42 |
| TraesCS6B01G324200.1 | Wheat | plasma membrane | 60.04 | 62.4 |
| TraesCS7B01G113000.1 | Wheat | golgi | 60.64 | 62.12 |
| TraesCS7B01G449000.1 | Wheat | golgi | 57.26 | 59.14 |
| TraesCS7B01G449300.1 | Wheat | plasma membrane | 56.06 | 59.0 |
| TraesCS7B01G113200.1 | Wheat | golgi | 56.66 | 57.34 |
| TraesCS1B01G048000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 54.67 | 56.35 |
| TraesCS1B01G053700.1 | Wheat | endoplasmic reticulum | 54.87 | 55.53 |
| TraesCS6B01G036000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 53.88 | 55.53 |
| TraesCS7B01G113100.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 49.3 | 55.11 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 53.88 | 54.64 |
| KRH35956 | Soybean | plasma membrane | 52.88 | 53.63 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 52.49 | 53.23 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 41.15 | 53.21 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 52.29 | 53.02 |
| TraesCS6B01G373000.1 | Wheat | endoplasmic reticulum, golgi | 43.94 | 53.0 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 52.09 | 52.82 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 52.09 | 52.82 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 52.09 | 52.82 |
| Bra024749.1-P | Field mustard | plasma membrane | 52.09 | 52.72 |
| CDY42109 | Canola | plasma membrane | 52.09 | 52.72 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 51.49 | 52.64 |
| PGSC0003DMT400037757 | Potato | plastid | 48.11 | 52.49 |
| CDY04232 | Canola | plasma membrane | 51.69 | 52.31 |
| AT1G25450.1 | Thale cress | plasma membrane | 51.09 | 52.24 |
| Bra004034.1-P | Field mustard | plasma membrane | 51.09 | 52.24 |
| CDY07381 | Canola | plasma membrane | 51.49 | 52.11 |
| TraesCS3B01G313800.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 52.29 | 51.98 |
| AT1G68530.1 | Thale cress | plasma membrane | 51.09 | 51.71 |
| Solyc02g063140.2.1 | Tomato | golgi | 50.89 | 51.61 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 50.3 | 51.21 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 50.1 | 51.01 |
| TraesCS7B01G006100.1 | Wheat | mitochondrion | 49.11 | 50.72 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 41.15 | 49.29 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 48.11 | 49.19 |
| TraesCS7B01G006300.1 | Wheat | golgi | 47.51 | 49.08 |
| TraesCS2B01G535600.1 | Wheat | golgi, mitochondrion | 46.52 | 48.25 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 48.31 | 46.82 |
| TraesCS2B01G535700.1 | Wheat | endoplasmic reticulum, plasma membrane | 42.35 | 46.51 |
| TraesCS6B01G098300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 46.32 | 45.42 |
| TraesCS1B01G436300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 47.32 | 45.33 |
| TraesCS7B01G254900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 45.73 | 44.15 |
| TraesCS6B01G207000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 45.33 | 43.51 |
| TraesCS1B01G387800.2 | Wheat | plasma membrane | 41.55 | 41.72 |
| TraesCS4B01G278800.1 | Wheat | golgi | 41.55 | 40.98 |
| TraesCS6B01G473900.1 | Wheat | mitochondrion | 40.16 | 40.08 |
| TraesCS4B01G225500.1 | Wheat | peroxisome | 41.75 | 38.46 |
| TraesCS4B01G297500.1 | Wheat | golgi | 40.56 | 37.78 |
| TraesCS1B01G443100.1 | Wheat | cytosol | 6.16 | 14.03 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF12 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS6B01G372900 | EnsemblPlants:TraesCS6B01G372900.1 |
| TIGR:cd00831 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:646240407..646241918
Molecular Weight (calculated)
55417.4 Da
IEP (calculated)
9.159
GRAVY (calculated)
0.083
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSGIWKNL KFLFKFVVDN FLSVVTVPIA AATIVLVARL GPDEILGRLR ALTPAYLFLS CFLPASAVTM YLLSQPRKVC LVDYACFHGT HLNRVPFSAF
101: LECARQSTTL NERSIRFMSR LLESSGLGEE TCLPTPVHYI PWKKYLTLEA AREEAELVVF SAIDELFSKT NVCPDTIDIL VVNCSGFNPT PSFIDMIINK
201: YKLRGDIRSV HLSGMGCSAG LISVEAARNL LQTARRGARA LVVSTETLSP LLYDGNERAM LLPFCLFRMG GAAVLLSTST AKARLQLMSV VRTLTAADDN
301: SYKCIHREED DKGHTGVNLS KDLIAAAGRT LKANITTLAP IILPISEKLL FAMSFVAQKL SSGRSKVYIP NFLTAIEHFC IHAGGTAVID EVQRNLSLSN
401: EHVEPSRMTL HRFGNTSSSS TWYELAYIEA KGHMHRGDRV WMIGFGSGFK CNSVVWKCIA PAPNTNGPWA GCIHRYPVQI KSPKTSTGNT RMAGHNNKQL
501: RDT
101: LECARQSTTL NERSIRFMSR LLESSGLGEE TCLPTPVHYI PWKKYLTLEA AREEAELVVF SAIDELFSKT NVCPDTIDIL VVNCSGFNPT PSFIDMIINK
201: YKLRGDIRSV HLSGMGCSAG LISVEAARNL LQTARRGARA LVVSTETLSP LLYDGNERAM LLPFCLFRMG GAAVLLSTST AKARLQLMSV VRTLTAADDN
301: SYKCIHREED DKGHTGVNLS KDLIAAAGRT LKANITTLAP IILPISEKLL FAMSFVAQKL SSGRSKVYIP NFLTAIEHFC IHAGGTAVID EVQRNLSLSN
401: EHVEPSRMTL HRFGNTSSSS TWYELAYIEA KGHMHRGDRV WMIGFGSGFK CNSVVWKCIA PAPNTNGPWA GCIHRYPVQI KSPKTSTGNT RMAGHNNKQL
501: RDT
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.