Factsheet for TraesCS1B01G387800.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G374700.1	Wheat	plasma membrane	95.01	93.89
TraesCS1A01G369100.1	Wheat	golgi	90.82	90.28
HORVU7Hr1G023530.2	Barley	endoplasmic reticulum, extracellular	71.26	73.61
TraesCS4B01G278800.1	Wheat	golgi	73.45	72.16
TraesCS6B01G473900.1	Wheat	mitochondrion	67.66	67.26
GSMUA_Achr6P23320_001	Banana	endoplasmic reticulum, golgi, vacuole	44.11	55.39
TraesCS7B01G254900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	56.69	54.51
TraesCS6B01G098300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	52.89	51.66
TraesCS6B01G207000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	53.49	51.15
TraesCS1B01G421100.1	Wheat	golgi	46.31	50.0
TraesCS1B01G436300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	50.7	48.38
TraesCS6B01G324200.1	Wheat	plasma membrane	45.11	46.69
TraesCS7B01G113100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	41.12	45.78
TraesCS7B01G449300.1	Wheat	plasma membrane	43.31	45.4
TraesCS7B01G449000.1	Wheat	golgi	43.71	44.97
TraesCS7B01G113000.1	Wheat	golgi	43.91	44.81
TraesCS4B01G225500.1	Wheat	peroxisome	48.1	44.14
TraesCS4B01G274700.1	Wheat	plastid	42.12	44.05
TraesCS6B01G373000.1	Wheat	endoplasmic reticulum, golgi	36.33	43.65
TraesCS3B01G488500.1	Wheat	plasma membrane	41.92	42.86
TraesCS6B01G372900.1	Wheat	golgi	41.72	41.55
TraesCS2B01G535700.1	Wheat	endoplasmic reticulum, plasma membrane	37.52	41.05
TraesCS7B01G006100.1	Wheat	mitochondrion	39.72	40.86
TraesCS4B01G297500.1	Wheat	golgi	43.91	40.74
TraesCS6B01G036000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	39.52	40.57
TraesCS2B01G535600.1	Wheat	golgi, mitochondrion	38.92	40.21
TraesCS1B01G053700.1	Wheat	endoplasmic reticulum	39.72	40.04
TraesCS3B01G313800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	40.12	39.72
TraesCS1B01G048000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	38.52	39.55
TraesCS7B01G113200.1	Wheat	golgi	39.12	39.44
TraesCS7B01G006300.1	Wheat	golgi	37.92	39.01
TraesCS1B01G443100.1	Wheat	cytosol	7.78	17.65

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF13	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS1B01G387800	EnsemblPlants:TraesCS1B01G387800.2
TIGR:cd00831	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:621987241..621988914

Molecular Weight (calculated)

54819.7 Da

IEP (calculated)

8.405

GRAVY (calculated)

0.163

Length

501 amino acids

Sequence
(BLAST)

001: MDNELGKGVG NQAKLLYRRL VGQRPHLLAL TLLLVVSWLV LMTLLSLDGV YALLHGAHGV MAVSVAGAVA AAYVYALSLR PVYLVDFAGY KPAPAHELTR
101: ARTIHRYGLT GVFTAESMSF QKRVLERSGL GEATHLPASI IRVPLDICLR TANEESHAVV FGVIDHLLAK TRVRPDDIGV VIVNSSLYSP TPSFTSLVAN
201: RYCLRDDVVT HNLSGMGCSA GVIAIDLARH LLQVYHDTYA LVVSTENITL NAYLGNTRPM LVTNMLFRVG GAAVLLSNRC NDRRRAKYQL IHTVRTHHGP
301: SDKSYACVTQ EEDEVGNLGV SLSKDLMSVA GDALRTNITT LGPLVLPLRE QLRFLGAVVL KRVFGTTVMS CLPDFTLALE HFCIHAGGRG VLDELQRSLK
401: LGEWHMEPSR MTLCRFGNTS SSSLWYELAY CEAKGRIKRG DRVWQIAFGS GFKCNSAVWK ALRTVDGAVA VEEGSPWAQD IDVLPLHVPK VTPIDEDVPA
501: V

Best Arabidopsis Sequence Match ( AT1G01120.1 )
(BLAST)

001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ

Arabidopsis Description

KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.