Factsheet for TraesCS4B01G278800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G277300.1	Wheat	golgi	98.24	98.43
TraesCS4A01G025300.1	Wheat	golgi	98.24	98.43
HORVU4Hr1G073840.2	Barley	golgi	97.45	97.64
TraesCS6B01G473900.1	Wheat	mitochondrion	73.92	74.8
TraesCS1B01G387800.2	Wheat	plasma membrane	72.16	73.45
EER95458	Sorghum	mitochondrion	74.51	71.83
Zm00001d027766_P001	Maize	mitochondrion	73.73	71.08
GSMUA_Achr6P23320_001	Banana	endoplasmic reticulum, golgi, vacuole	46.08	58.9
TraesCS7B01G254900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	56.27	55.09
TraesCS6B01G098300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	54.12	53.8
TraesCS6B01G207000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	53.92	52.48
TraesCS1B01G421100.1	Wheat	golgi	47.06	51.72
TraesCS1B01G436300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	52.16	50.67
TraesCS6B01G324200.1	Wheat	plasma membrane	46.86	49.38
TraesCS7B01G449300.1	Wheat	plasma membrane	44.9	47.91
TraesCS4B01G274700.1	Wheat	plastid	44.51	47.39
TraesCS7B01G113000.1	Wheat	golgi	45.1	46.84
TraesCS7B01G449000.1	Wheat	golgi	44.51	46.61
TraesCS4B01G225500.1	Wheat	peroxisome	49.8	46.52
TraesCS7B01G113100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	40.98	46.44
TraesCS6B01G373000.1	Wheat	endoplasmic reticulum, golgi	37.45	45.8
TraesCS6B01G036000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	42.35	44.26
TraesCS3B01G488500.1	Wheat	plasma membrane	41.96	43.67
TraesCS1B01G048000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	40.59	42.42
TraesCS2B01G535700.1	Wheat	endoplasmic reticulum, plasma membrane	38.04	42.36
TraesCS7B01G113200.1	Wheat	golgi	41.18	42.25
TraesCS7B01G006100.1	Wheat	mitochondrion	40.2	42.09
TraesCS2B01G535600.1	Wheat	golgi, mitochondrion	40.0	42.06
TraesCS1B01G053700.1	Wheat	endoplasmic reticulum	40.98	42.05
TraesCS4B01G297500.1	Wheat	golgi	44.31	41.85
TraesCS6B01G372900.1	Wheat	golgi	40.98	41.55
TraesCS7B01G006300.1	Wheat	golgi	38.82	40.66
TraesCS3B01G313800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	40.2	40.51
TraesCS1B01G443100.1	Wheat	cytosol	7.25	16.74

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF13	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS4B01G278800	EnsemblPlants:TraesCS4B01G278800.1
TIGR:cd00831	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:562052224..562056191

Molecular Weight (calculated)

55666.3 Da

IEP (calculated)

8.743

GRAVY (calculated)

0.051

Length

510 amino acids

Sequence
(BLAST)

001: MDRDLFRTVK QGTRNQARLL YHRLVCRLPH LLAVTLLLVV APRLVSTLSL AALWSEARAN AAVLLAACAG CAAAAYAYAM SRPRPVYLVD LAGYKPGPAH
101: EATRAQAIRQ FGLAGGFDDE SMSFQKRMME RSGLGEATHF PASLMSIPVD MCLQTARDES EAVVFGVVDE LLAKTGVRAE DIGVVIANSS LYSPTPSFVS
201: LIVNRYRLRH DVVSHNLSGM GCSAGIIAID LAKHLLQVHP DTYALVVSTE NITLNAYLGN NRPMLVTNTL FRVGGAAVLL SNRRQERARA KYQLIHTVRT
301: HRGASDRSYG CVTQEEDDAG HVGVSLSKEL MSVAGEALRT NITTLGPLVL PLSEQLRFLA TVVLKRVFRA DVKPHIPDFT LALDHFCIHA GGRGVLDELE
401: RSLKLSAWHM EPSRMTLYRF GNTSSSSLWY ELAYCEAKGR IKKGDRVWQI AFGSGFKCNS AVWKALRAVD AVAVGDTGSP WAQDVDVLPV HVPKVVPIDD
501: DEASYKTAAA

Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)

001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR

Arabidopsis Description

KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.