Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G025300.1 | Wheat | golgi | 98.82 | 98.82 |
| TraesCS4B01G278800.1 | Wheat | golgi | 98.43 | 98.24 |
| HORVU4Hr1G073840.2 | Barley | golgi | 97.25 | 97.25 |
| EER95458 | Sorghum | mitochondrion | 74.26 | 71.46 |
| TraesCS1D01G374700.1 | Wheat | plasma membrane | 70.73 | 71.01 |
| Zm00001d027766_P001 | Maize | mitochondrion | 73.67 | 70.89 |
| GSMUA_Achr6P23320_001 | Banana | endoplasmic reticulum, golgi, vacuole | 46.17 | 58.9 |
| TraesCS7D01G350500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 57.37 | 56.05 |
| TraesCS4D01G148300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 54.03 | 53.71 |
| TraesCS1D01G420900.1 | Wheat | peroxisome | 54.42 | 53.37 |
| TraesCS6D01G166600.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 54.22 | 52.67 |
| TraesCS4D01G242200.1 | Wheat | mitochondrion, plasma membrane | 50.49 | 51.81 |
| TraesCS6D01G071600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 55.01 | 51.38 |
| TraesCS1D01G401000.1 | Wheat | plasma membrane | 46.76 | 51.29 |
| TraesCS1D01G414600.1 | Wheat | peroxisome | 52.46 | 50.86 |
| TraesCS6D01G274600.1 | Wheat | golgi, plasma membrane | 47.94 | 50.41 |
| TraesCS7D01G208600.1 | Wheat | cytosol | 37.13 | 49.48 |
| TraesCS7D01G089200.1 | Wheat | endoplasmic reticulum, plasma membrane | 44.79 | 48.2 |
| TraesCS7D01G102300.1 | Wheat | mitochondrion | 27.31 | 47.93 |
| TraesCS7D01G519300.1 | Wheat | golgi, plasma membrane | 44.99 | 47.91 |
| TraesCS7D01G209400.1 | Wheat | cytosol | 35.17 | 47.86 |
| TraesCS2D01G508000.1 | Wheat | mitochondrion | 29.86 | 47.8 |
| TraesCS4D01G008100.1 | Wheat | plasma membrane | 40.08 | 47.66 |
| TraesCS7D01G029500.1 | Wheat | plasma membrane | 42.63 | 47.48 |
| TraesCS7D01G035700.1 | Wheat | plasma membrane | 45.19 | 47.42 |
| TraesCS7D01G519400.1 | Wheat | plasma membrane | 44.6 | 47.39 |
| TraesCS4D01G273400.1 | Wheat | endoplasmic reticulum | 44.79 | 47.2 |
| TraesCS4D01G226100.1 | Wheat | peroxisome | 49.12 | 46.38 |
| TraesCS7D01G208500.1 | Wheat | golgi | 44.99 | 46.36 |
| TraesCS1D01G042300.1 | Wheat | golgi | 41.45 | 44.14 |
| TraesCS2D01G508200.1 | Wheat | plasma membrane, plastid | 39.1 | 43.45 |
| TraesCS3D01G444000.1 | Wheat | golgi | 41.65 | 43.35 |
| TraesCS7D01G102800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 37.33 | 42.32 |
| TraesCS7D01G208800.1 | Wheat | endoplasmic reticulum | 40.27 | 42.27 |
| TraesCS3D01G279300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 40.27 | 42.09 |
| TraesCS2D01G508300.1 | Wheat | endoplasmic reticulum, plasma membrane | 38.11 | 42.08 |
| TraesCS1D01G039200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 40.08 | 41.98 |
| TraesCS6D01G321600.1 | Wheat | golgi | 41.26 | 41.75 |
| TraesCS4D01G296400.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.81 | 41.3 |
| TraesCS7D01G208700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 37.13 | 40.91 |
| TraesCS5D01G089800.1 | Wheat | golgi | 39.29 | 40.9 |
| TraesCS4D01G008200.1 | Wheat | plasma membrane | 39.49 | 40.85 |
| TraesCS7D01G102000.1 | Wheat | mitochondrion, plastid | 39.29 | 40.24 |
| TraesCS7D01G102900.1 | Wheat | golgi, plasma membrane, plastid | 37.52 | 39.79 |
| TraesCS5D01G017000.1 | Wheat | endoplasmic reticulum, golgi, plastid | 36.74 | 39.62 |
| TraesCS7D01G102400.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 36.15 | 38.33 |
| TraesCS1D01G420600.2 | Wheat | cytosol | 7.27 | 16.74 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF13 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS4D01G277300 | EnsemblPlants:TraesCS4D01G277300.1 |
| TIGR:cd00831 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:449458613..449462408
Molecular Weight (calculated)
55460.0 Da
IEP (calculated)
9.014
GRAVY (calculated)
0.053
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRDLFRTVK QGTRNQARLL YHRLVCRLPH LLAVTLLLVV APPLVSTLSL AALWSEARAN AAVLVAACAG CAAAAYAYAT SRPRPVYLVD LAGYKPGPAH
101: EATRAQAIRQ FGLAGGFDDD SMSFQKRMME RSGLGEATHF PASLMSIPVD MCLQTARDES EAVVFGVVDK LLAKTGVRAE DIGIVIANSS LYSPTPSFVS
201: LIVNRYRLRH DVVSHNLSGM GCSAGIIAID LAKHLLQVHP DTYALVVSTE NITLNAYLGN NRPMLVTNTL FRVGGAAVLL SNRRQERARA KYQLIHTVRT
301: HRGASDRSYG CVTQEEDDAG HVGVSLSKEL MSVAGEALRT NITTLGPLVL PLSEQLRFLA TVVLKRVFRA DVKPHIPDFT LALDHFCIHA GGRGVLDELE
401: RSLKLSAWHM EPSRMTLYRF GNTSSSSLWY ELAYCEAKGR IKKGDRVWQI AFGSGFKCNS AVWKALRAVD AVAVGDAGSP WAQDVDVLPV HVPKVVPIDD
501: DQASYKTAA
101: EATRAQAIRQ FGLAGGFDDD SMSFQKRMME RSGLGEATHF PASLMSIPVD MCLQTARDES EAVVFGVVDK LLAKTGVRAE DIGIVIANSS LYSPTPSFVS
201: LIVNRYRLRH DVVSHNLSGM GCSAGIIAID LAKHLLQVHP DTYALVVSTE NITLNAYLGN NRPMLVTNTL FRVGGAAVLL SNRRQERARA KYQLIHTVRT
301: HRGASDRSYG CVTQEEDDAG HVGVSLSKEL MSVAGEALRT NITTLGPLVL PLSEQLRFLA TVVLKRVFRA DVKPHIPDFT LALDHFCIHA GGRGVLDELE
401: RSLKLSAWHM EPSRMTLYRF GNTSSSSLWY ELAYCEAKGR IKKGDRVWQI AFGSGFKCNS AVWKALRAVD AVAVGDAGSP WAQDVDVLPV HVPKVVPIDD
501: DQASYKTAA
001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
Arabidopsis Description
KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.