Factsheet for TraesCS7D01G350500.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, endoplasmic reticulum, plasma membrane
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G206200.2
TraesCS4B01G109800.2
TraesCS4D01G107200.1
TraesCS5A01G107900.1
TraesCS5B01G115400.1
TraesCS5D01G122800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26640.1	TraesCS4A01G206200.2	AT4G09570.1	19130088
AT2G26640.1	TraesCS4B01G109800.2	AT4G09570.1	19130088
AT2G26640.1	TraesCS4D01G107200.1	AT4G09570.1	19130088
AT2G26640.1	TraesCS5A01G107900.1	AT4G09570.1	19130088
AT2G26640.1	TraesCS5B01G115400.1	AT4G09570.1	19130088
AT2G26640.1	TraesCS5D01G122800.1	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G254900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	97.31	97.31
TraesCS7A01G372300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	93.86	92.97
HORVU7Hr1G084610.6	Barley	cytosol, mitochondrion, plastid	96.35	83.67
TraesCS6D01G166600.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	81.0	80.53
GSMUA_AchrUn_...	Banana	peroxisome	60.27	79.09
KRH56654	Soybean	endoplasmic reticulum	76.58	78.24
AT2G26640.1	Thale cress	plasma membrane	76.2	78.0
Solyc06g065560.1.1	Tomato	nucleus	76.58	77.78
PGSC0003DMT400067205	Potato	peroxisome	76.58	77.78
KRH03757	Soybean	cytosol, peroxisome, plasma membrane	76.01	77.65
VIT_04s0008g04710.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	75.82	77.3
Solyc08g067410.1.1	Tomato	plasma membrane	74.86	77.23
GSMUA_Achr10P...	Banana	plasma membrane	63.92	77.08
PGSC0003DMT400019029	Potato	plasma membrane	74.66	77.03
CDX70186	Canola	plastid	75.82	77.0
GSMUA_Achr7P08410_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	57.2	76.21
Bra009413.1-P	Field mustard	cytosol, golgi, plasma membrane	75.62	76.21
CDX98800	Canola	plastid	75.62	76.06
KRH63016	Soybean	cytosol, peroxisome, plasma membrane	73.51	75.1
KRH54862	Soybean	cytosol, peroxisome, plasma membrane	72.55	74.12
Solyc12g006820.1.1	Tomato	plasma membrane	70.25	73.2
TraesCS1D01G420900.1	Wheat	peroxisome	71.78	72.06
PGSC0003DMT400002734	Potato	cytosol, peroxisome, plasma membrane	70.25	71.62
TraesCS4D01G148300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	67.18	68.36
VIT_11s0016g04700.t01	Wine grape	plastid	76.97	64.99
TraesCS1D01G414600.1	Wheat	peroxisome	65.45	64.95
TraesCS6D01G071600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome, plastid	67.18	64.22
TraesCS4D01G242200.1	Wheat	mitochondrion, plasma membrane	60.08	63.1
TraesCS4D01G277300.1	Wheat	golgi	56.05	57.37
TraesCS4D01G226100.1	Wheat	peroxisome	57.39	55.47
TraesCS1D01G374700.1	Wheat	plasma membrane	52.78	54.24
TraesCS1D01G401000.1	Wheat	plasma membrane	46.64	52.37
TraesCS4D01G296400.1	Wheat	cytosol, peroxisome, plasma membrane	53.74	51.85
TraesCS6D01G274600.1	Wheat	golgi, plasma membrane	46.64	50.21
TraesCS7D01G208600.1	Wheat	cytosol	36.28	49.48
TraesCS4D01G008100.1	Wheat	plasma membrane	40.5	49.3
TraesCS7D01G519300.1	Wheat	golgi, plasma membrane	45.11	49.16
TraesCS7D01G519400.1	Wheat	plasma membrane	44.91	48.85
TraesCS7D01G029500.1	Wheat	plasma membrane	42.61	48.58
TraesCS7D01G035700.1	Wheat	plasma membrane	45.11	48.45
TraesCS2D01G508000.1	Wheat	mitochondrion	29.56	48.43
TraesCS7D01G208500.1	Wheat	golgi	45.87	48.38
TraesCS7D01G102300.1	Wheat	mitochondrion	26.68	47.93
TraesCS7D01G209400.1	Wheat	cytosol	34.36	47.86
TraesCS4D01G273400.1	Wheat	endoplasmic reticulum	44.34	47.83
TraesCS7D01G089200.1	Wheat	endoplasmic reticulum, plasma membrane	43.38	47.78
TraesCS3D01G444000.1	Wheat	golgi	43.38	46.22
TraesCS1D01G042300.1	Wheat	golgi	42.03	45.82
TraesCS6D01G321600.1	Wheat	golgi	44.15	45.73
TraesCS2D01G508200.1	Wheat	plasma membrane, plastid	39.35	44.76
TraesCS1D01G039200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	41.27	44.24
TraesCS5D01G089800.1	Wheat	golgi	41.46	44.17
TraesCS7D01G208800.1	Wheat	endoplasmic reticulum	40.69	43.71
TraesCS2D01G508300.1	Wheat	endoplasmic reticulum, plasma membrane	38.58	43.6
TraesCS7D01G102800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	36.66	42.54
TraesCS7D01G102900.1	Wheat	golgi, plasma membrane, plastid	39.16	42.5
TraesCS7D01G208700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	37.43	42.21
TraesCS3D01G279300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	39.35	42.09
TraesCS4D01G008200.1	Wheat	plasma membrane	38.96	41.26
TraesCS7D01G102000.1	Wheat	mitochondrion, plastid	39.35	41.25
TraesCS7D01G102400.1	Wheat	endoplasmic reticulum, plastid, vacuole	37.62	40.83
TraesCS5D01G017000.1	Wheat	endoplasmic reticulum, golgi, plastid	35.51	39.19
TraesCS1D01G420600.2	Wheat	cytosol	7.1	16.74

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF8	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS7D01G350500	EnsemblPlants:TraesCS7D01G350500.1
TIGR:cd00831	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:451185674..451188595

Molecular Weight (calculated)

57869.2 Da

IEP (calculated)

8.963

GRAVY (calculated)

-0.058

Length

521 amino acids

Sequence
(BLAST)

001: MDSPAPNAAN PPPAAAEPAT QPRRLPDFLQ SVRLKYVKLG YHHLISHGTY LLLSPLMALV AVQLSTVSPG DLADLWEQLR FNLVSVLVCS TLLVFLSTVY
101: FLTRPRPVYL VDFACYKPEP ERRCTRQTFM RCSEATGSFT DANLDFQRKI LERSGLGEDT YLPPAVLRVP PNPCMDEARK EASTVMFGAI DQLLEKTGVR
201: PKDIGILVVN CSLFNPTPSL SAMVVNHYRL RGNVVSYNLG GMGCSAGLLS IDLAKDLLQV HPNSYALVIS MENITLNWYF GNDRSMLVSN CLFRMGGAAI
301: LLSNRRADRR RSKYELVHTV RTHKGADDRC FGCVTQQEDS AGKVGVSLSK DLMAVAGDAL KTNITTLGPL VLPLSEQLLF MATLVAKKAF KVKIKPYIPD
401: FKLAFEHFCI HAGGRAVLNE LEKNLGLTEW HMEPSRMTLY RFGNTSSSSL WYELAYSEAK GRIGRRDRVW QIAFGSGFKC NSAVWRALRA VAPEAEASNP
501: WADEIDRFPV EVPRVSRVGN A

Best Arabidopsis Sequence Match ( AT2G26640.1 )
(BLAST)

001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI

Arabidopsis Description

KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.