Factsheet for HORVU7Hr1G084610.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G019530.1
HORVU5Hr1G032550.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26640.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT2G26640.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G254900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	84.33	97.12
TraesCS7D01G350500.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	83.67	96.35
TraesCS7A01G372300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	81.83	93.35
GSMUA_AchrUn_...	Banana	peroxisome	52.67	79.6
KRH56654	Soybean	endoplasmic reticulum	67.0	78.82
AT2G26640.1	Thale cress	plasma membrane	66.83	78.78
PGSC0003DMT400067205	Potato	peroxisome	67.17	78.56
Solyc06g065560.1.1	Tomato	nucleus	67.17	78.56
KRH03757	Soybean	cytosol, peroxisome, plasma membrane	66.5	78.24
VIT_04s0008g04710.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	66.5	78.08
Solyc08g067410.1.1	Tomato	plasma membrane	65.67	78.02
PGSC0003DMT400019029	Potato	plasma membrane	65.5	77.82
GSMUA_Achr10P...	Banana	plasma membrane	56.0	77.78
CDX70186	Canola	plastid	66.5	77.78
GSMUA_Achr7P08410_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	50.33	77.24
Bra009413.1-P	Field mustard	cytosol, golgi, plasma membrane	66.33	76.98
CDX98800	Canola	plastid	66.33	76.83
KRH63016	Soybean	cytosol, peroxisome, plasma membrane	64.33	75.69
KRH54862	Soybean	cytosol, peroxisome, plasma membrane	63.5	74.71
HORVU6Hr1G036950.5	Barley	cytosol, peroxisome	71.83	74.7
Solyc12g006820.1.1	Tomato	plasma membrane	61.83	74.2
HORVU1Hr1G090730.1	Barley	peroxisome, plasma membrane, plastid	62.83	72.78
PGSC0003DMT400002734	Potato	cytosol, peroxisome, plasma membrane	61.83	72.6
VIT_11s0016g04700.t01	Wine grape	plastid	68.17	66.29
HORVU4Hr1G067340.2	Barley	golgi	51.33	61.48
HORVU1Hr1G089710.3	Barley	plastid	57.17	58.23
HORVU4Hr1G073840.2	Barley	golgi	47.83	56.39
HORVU4Hr1G063420.1	Barley	peroxisome	50.0	55.05
HORVU7Hr1G023530.2	Barley	endoplasmic reticulum, extracellular	42.67	52.78
HORVU6Hr1G073300.1	Barley	golgi, plasma membrane	40.0	49.59
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	38.0	49.57
HORVU7Hr1G006910.1	Barley	plasma membrane	39.83	49.08
HORVU1Hr1G086760.1	Barley	cytosol	39.5	46.93
HORVU7Hr1G023540.1	Barley	mitochondrion	22.17	46.67
HORVU3Hr1G097570.1	Barley	golgi	37.83	46.42
HORVU7Hr1G023280.1	Barley	plasma membrane	34.67	46.02
HORVU4Hr1G076940.1	Barley	mitochondrion, peroxisome, plastid	33.0	45.21
HORVU6Hr1G082270.1	Barley	golgi	38.17	44.73
HORVU7Hr1G042040.1	Barley	golgi	36.67	44.35
HORVU6Hr1G004830.1	Barley	golgi	36.67	44.35
HORVU6Hr1G094160.2	Barley	endoplasmic reticulum, golgi, plasma membrane	36.17	44.29
HORVU2Hr1G112840.1	Barley	endoplasmic reticulum, golgi	34.5	44.23
HORVU7Hr1G042050.1	Barley	golgi	34.83	42.92
HORVU7Hr1G022720.1	Barley	plasma membrane	25.17	42.06
HORVU7Hr1G022580.1	Barley	golgi, mitochondrion	25.0	41.1
HORVU7Hr1G030880.1	Barley	plasma membrane	33.17	39.88
HORVU5Hr1G087530.1	Barley	plasma membrane	31.83	39.3
HORVU7Hr1G022780.1	Barley	golgi, mitochondrion	30.83	39.03
HORVU5Hr1G122360.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	31.5	38.26
HORVU3Hr1G069880.2	Barley	mitochondrion, plastid	34.17	38.25

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	UniProt:A0A287X585
InterPro:ACP_syn_III_C	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016747	EnsemblPlantsGene:HORVU7Hr1G084610	EnsemblPlants:HORVU7Hr1G084610.6	InterPro:IPR016039
PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF8	SUPFAM:SSF53901
TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000B4775B1	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:+:509431830..509434286

Molecular Weight (calculated)

66242.5 Da

IEP (calculated)

9.298

GRAVY (calculated)

-0.070

Length

600 amino acids

Sequence
(BLAST)

001: PCRFSPLPPS PPIKDARGRA ACRIGATHRE SEREREGGRR SGSSLLPLLL VLPRGAQQIG CLRPSPSPPL LPSALPGYVY VPAPNAANTP AQAAAEPAAQ
101: PRLLPDFLQS VRLKYVKLGY HHLISHGMYL LLSPLMALVA VQLSTVSPSD LADLWEQLRF NLVSVVVCST LLVFLSTVYF LTRPRPVYLV DFACYKPGPE
201: RRCTRQTFMR CSEATGSFTD ANLDFQRKIL ERSGLGEDTY LPPAVLRVPP NPCMDEARKE ASTVMFGAID QLLEKTGVRP KDIGILVVNC SLFNPTPSLS
301: AMVVNHYRLR GNVVSYNLGG MGCSAGLLSI DLAKDLLQVH PNSYALVISM ENITLNWYFG NDRSMLVSNC LFRMGGAAIL LSNKRSDRRR SKYELVHTVR
401: THKGADDKCF GCVTQQEDDA GKVGVSLSKD LMAVAGDALK TNITTLGPLV LPLSEQLLFM ATLVAKKAFK VKIKPYIPDF KLAFEHFCIH AGGRAVLDEL
501: EKNLGLTEWH MEPSRMTLYR FGNTSSSSLW YELAYSEAKG RIGRRDRVWQ IAFGSGFKCN SAVWRALRAV APEAEGTNPW MDEIDRFPVE VPRVSRVGTA

Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)

001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR

Arabidopsis Description

KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.