Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G508200.1 | Wheat | plasma membrane, plastid | 86.32 | 88.21 |
| TraesCS2A01G507700.1 | Wheat | golgi, plasma membrane | 86.32 | 88.21 |
| HORVU7Hr1G023540.1 | Barley | mitochondrion | 44.87 | 73.68 |
| HORVU7Hr1G022780.1 | Barley | golgi, mitochondrion | 68.16 | 67.3 |
| HORVU7Hr1G030880.1 | Barley | plasma membrane | 71.58 | 67.13 |
| HORVU7Hr1G022580.1 | Barley | golgi, mitochondrion | 51.5 | 66.03 |
| HORVU0Hr1G038430.1 | Barley | endoplasmic reticulum, plasma membrane | 52.14 | 53.04 |
| HORVU6Hr1G073300.1 | Barley | golgi, plasma membrane | 52.99 | 51.24 |
| HORVU7Hr1G023280.1 | Barley | plasma membrane | 48.93 | 50.66 |
| HORVU7Hr1G006910.1 | Barley | plasma membrane | 51.5 | 49.49 |
| HORVU7Hr1G022720.1 | Barley | plasma membrane | 37.61 | 49.03 |
| HORVU6Hr1G094160.2 | Barley | endoplasmic reticulum, golgi, plasma membrane | 51.28 | 48.98 |
| HORVU1Hr1G086760.1 | Barley | cytosol | 52.56 | 48.71 |
| HORVU7Hr1G042050.1 | Barley | golgi | 50.43 | 48.46 |
| HORVU3Hr1G097570.1 | Barley | golgi | 50.43 | 48.26 |
| HORVU6Hr1G004830.1 | Barley | golgi | 50.21 | 47.38 |
| HORVU7Hr1G042040.1 | Barley | golgi | 49.36 | 46.57 |
| HORVU5Hr1G087530.1 | Barley | plasma membrane | 47.44 | 45.68 |
| PGSC0003DMT400037757 | Potato | plastid | 44.87 | 45.55 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 47.44 | 45.12 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 37.39 | 44.99 |
| KRH35956 | Soybean | plasma membrane | 47.44 | 44.76 |
| HORVU6Hr1G082270.1 | Barley | golgi | 48.93 | 44.73 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 47.22 | 44.56 |
| HORVU5Hr1G122360.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 47.01 | 44.53 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 46.15 | 43.9 |
| HORVU4Hr1G067340.2 | Barley | golgi | 46.79 | 43.71 |
| HORVU3Hr1G069880.2 | Barley | mitochondrion, plastid | 50.0 | 43.66 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 46.15 | 43.55 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 45.73 | 43.15 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 45.73 | 43.15 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 45.73 | 43.15 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 45.73 | 43.15 |
| Bra004034.1-P | Field mustard | plasma membrane | 45.3 | 43.09 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 45.3 | 42.91 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 38.46 | 42.86 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 45.09 | 42.71 |
| CDY42109 | Canola | plasma membrane | 45.3 | 42.66 |
| CDY07381 | Canola | plasma membrane | 45.3 | 42.66 |
| Bra024749.1-P | Field mustard | plasma membrane | 45.3 | 42.66 |
| CDY04232 | Canola | plasma membrane | 45.3 | 42.66 |
| Solyc02g063140.2.1 | Tomato | golgi | 44.87 | 42.34 |
| AT1G68530.1 | Thale cress | plasma membrane | 44.44 | 41.85 |
| AT1G25450.1 | Thale cress | plasma membrane | 43.8 | 41.67 |
| HORVU4Hr1G073840.2 | Barley | golgi | 44.02 | 40.47 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 44.87 | 40.46 |
| HORVU1Hr1G090730.1 | Barley | peroxisome, plasma membrane, plastid | 44.66 | 40.35 |
| HORVU7Hr1G023530.2 | Barley | endoplasmic reticulum, extracellular | 40.81 | 39.38 |
| HORVU4Hr1G063420.1 | Barley | peroxisome | 44.02 | 37.8 |
| HORVU1Hr1G089710.3 | Barley | plastid | 44.87 | 35.65 |
| HORVU6Hr1G036950.5 | Barley | cytosol, peroxisome | 43.59 | 35.36 |
| HORVU7Hr1G084610.6 | Barley | cytosol, mitochondrion, plastid | 44.23 | 34.5 |
| HORVU4Hr1G076940.1 | Barley | mitochondrion, peroxisome, plastid | 26.07 | 27.85 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | UniProt:A0A287JGZ1 |
| InterPro:ACP_syn_III_C | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 |
| GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | EnsemblPlantsGene:HORVU2Hr1G112840 | EnsemblPlants:HORVU2Hr1G112840.1 |
| InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 | PANTHER:PTHR31561:SF18 |
| SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | UniParc:UPI000B47834D | SEG:seg | : |
Description
3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A287JGZ1]
Coordinates
chrchr2H:-:726891523..726893193
Molecular Weight (calculated)
52006.6 Da
IEP (calculated)
8.714
GRAVY (calculated)
0.210
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: ILVLRIVTTM ILATAVLTKV AEWFSAAHKI VPRPSTIYLI HLLLVALLIL IATSIYLAHR PRNVYLVDYT CFRPSSNFRF PKATSVEHAR LSPLLDDSTA
101: NFIASIHERS GMGDQTYFPP VVMHMEPYCA LAEARTEAEL VVFSVIDDLL AKTCINLDGV GVLITNCSLF CPVPSIADMI VNRYKLRGDL RVMNLSGMAC
201: SASVTAVGLA SNTLQFMPWG SYALVVSTEI IGPCYYVGNN RSMQLSNILF RMGGVAKLLS TSRSKARFRL GHFTRTNTAA SNIAYKCVYQ EEDEKGNIGV
301: ALSKDLMAVA RDALINNITA TAPLVLPPSE LFKFWLFCMA KKVLHWRKIR PHIPNFCAAF DHFCIHVGGP AVITSVQHGL SLSDKHVEPS RMTLHRFGNQ
401: STSSIWYELA YIEAKGRMKK GNRVWMIGFG AGYECNTVGW MCIQPSSCED GPWADYIDRY PVDLSNKV
101: NFIASIHERS GMGDQTYFPP VVMHMEPYCA LAEARTEAEL VVFSVIDDLL AKTCINLDGV GVLITNCSLF CPVPSIADMI VNRYKLRGDL RVMNLSGMAC
201: SASVTAVGLA SNTLQFMPWG SYALVVSTEI IGPCYYVGNN RSMQLSNILF RMGGVAKLLS TSRSKARFRL GHFTRTNTAA SNIAYKCVYQ EEDEKGNIGV
301: ALSKDLMAVA RDALINNITA TAPLVLPPSE LFKFWLFCMA KKVLHWRKIR PHIPNFCAAF DHFCIHVGGP AVITSVQHGL SLSDKHVEPS RMTLHRFGNQ
401: STSSIWYELA YIEAKGRMKK GNRVWMIGFG AGYECNTVGW MCIQPSSCED GPWADYIDRY PVDLSNKV
001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
Arabidopsis Description
KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.