Factsheet for HORVU5Hr1G087530.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G122360.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	84.57	83.2
HORVU3Hr1G069880.2	Barley	mitochondrion, plastid	66.67	60.45
Zm00001d044579_P001	Maize	golgi	60.7	59.72
HORVU6Hr1G073300.1	Barley	golgi, plasma membrane	52.47	52.69
HORVU7Hr1G023540.1	Barley	mitochondrion	30.86	52.63
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	48.97	51.74
HORVU1Hr1G086760.1	Barley	cytosol	53.29	51.29
HORVU3Hr1G097570.1	Barley	golgi	50.0	49.69
HORVU7Hr1G006910.1	Barley	plasma membrane	49.38	49.28
PGSC0003DMT400037757	Potato	plastid	45.47	47.94
HORVU2Hr1G112840.1	Barley	endoplasmic reticulum, golgi	45.68	47.44
KRH35956	Soybean	plasma membrane	48.35	47.38
HORVU6Hr1G094160.2	Barley	endoplasmic reticulum, golgi, plasma membrane	47.74	47.35
GSMUA_Achr3P07400_001	Banana	plasma membrane	37.86	47.3
HORVU7Hr1G042040.1	Barley	golgi	47.94	46.98
HORVU6Hr1G082270.1	Barley	golgi	49.38	46.88
KRG90814	Soybean	cytosol, golgi, plasma membrane	47.74	46.77
HORVU7Hr1G042050.1	Barley	golgi	46.71	46.61
VIT_14s0006g02990.t01	Wine grape	plasma membrane	46.91	46.34
HORVU4Hr1G067340.2	Barley	golgi	47.74	46.31
Solyc02g085870.2.1	Tomato	plasma membrane	46.91	45.97
PGSC0003DMT400032993	Potato	plasma membrane	46.71	45.77
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	46.71	45.77
HORVU6Hr1G004830.1	Barley	golgi	46.71	45.77
Bra004034.1-P	Field mustard	plasma membrane	45.88	45.33
AT1G68530.1	Thale cress	plasma membrane	46.3	45.27
CDY04232	Canola	plasma membrane	46.09	45.07
GSMUA_Achr5P05870_001	Banana	plasma membrane	38.89	45.0
PGSC0003DMT400037714	Potato	plasma membrane	45.68	44.94
CDY07381	Canola	plasma membrane	45.88	44.87
CDY42109	Canola	plasma membrane	45.68	44.67
Bra024749.1-P	Field mustard	plasma membrane	45.68	44.67
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	45.47	44.56
Solyc02g063140.2.1	Tomato	golgi	45.47	44.56
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	45.47	44.56
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	45.27	44.53
HORVU7Hr1G023280.1	Barley	plasma membrane	41.36	44.47
HORVU7Hr1G022780.1	Barley	golgi, mitochondrion	43.21	44.3
AT1G25450.1	Thale cress	plasma membrane	44.24	43.7
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	45.88	42.97
HORVU7Hr1G030880.1	Barley	plasma membrane	44.03	42.89
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	43.21	42.68
HORVU7Hr1G022720.1	Barley	plasma membrane	30.25	40.95
HORVU7Hr1G022580.1	Barley	golgi, mitochondrion	30.66	40.82
HORVU4Hr1G073840.2	Barley	golgi	39.09	37.33
HORVU1Hr1G090730.1	Barley	peroxisome, plasma membrane, plastid	39.3	36.87
HORVU7Hr1G023530.2	Barley	endoplasmic reticulum, extracellular	35.6	35.67
HORVU4Hr1G063420.1	Barley	peroxisome	38.89	34.68
HORVU1Hr1G089710.3	Barley	plastid	41.56	34.3
HORVU6Hr1G036950.5	Barley	cytosol, peroxisome	39.3	33.1
HORVU7Hr1G084610.6	Barley	cytosol, mitochondrion, plastid	39.3	31.83
HORVU4Hr1G076940.1	Barley	mitochondrion, peroxisome, plastid	24.28	26.94

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	UniProt:A0A287S586
InterPro:ACP_syn_III_C	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:HORVU5Hr1G087530	EnsemblPlants:HORVU5Hr1G087530.1
InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF9
SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000B481634	SEG:seg	:

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A287S586]

Coordinates

chrchr5H:+:578843089..578844952

Molecular Weight (calculated)

52744.0 Da

IEP (calculated)

8.239

GRAVY (calculated)

0.122

Length

486 amino acids

Sequence
(BLAST)

001: MQESYPHASF VLSSFVPVLL GVAVAAAALF LAASGELTAG GLRSLPPFYV VVAAASIIAA KLRHMCRPKE VYLVEYGCFR PRPCYRAPVA TCREHAQLMP
101: ELFDQQSINF MMRLMERSGL GAETCVPLAY HYIPPDQSLE AAREEAELVI FSAIDEAFAK TTSFLKPADV DVLVLNCSVL APTPSFADMV VNRYKLRPDV
201: RTFNLSGMGC SAALVSVGLV GNILRVAPPG TRALIVSTEI LSSTYYTGTD PSMLLPNCLF RMGAAATILS NSPEGARFRL GPVVRTVTSA RDADYRCVYM
301: DEDDKGNTAI RLSRNLPATA GRALRDNVAA FAPLVLPSSE QVRVALPMLK RKLLLLLGRR AEARLCRPDF RTAFQHFCIH AGGRGVINEA QDGLGLTDDD
401: VEASRMTLHR FGNTSSSSVL YELAYTEAKG RMKKGDRVWM VSFGAGFECN SVAWVCIKTG SAAGNDDGGP WADSIKRYPV HLPVLA

Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)

001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY

Arabidopsis Description

KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.