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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024749.1-P Field mustard plasma membrane 99.8 99.8
AT1G25450.1 Thale cress plasma membrane 87.12 88.01
CDY04232 Canola plasma membrane 87.73 87.73
CDY07381 Canola plasma membrane 87.53 87.53
KRG90814 Soybean cytosol, golgi, plasma membrane 83.5 83.67
KRH35956 Soybean plasma membrane 83.1 83.27
PGSC0003DMT400032993 Potato plasma membrane 81.29 81.45
Solyc02g085870.2.1 Tomato plasma membrane 81.29 81.45
Solyc02g063140.2.1 Tomato golgi 79.88 80.04
KRH45255 Soybean endoplasmic reticulum, peroxisome, plasma membrane 79.48 79.64
PGSC0003DMT400062136 Potato cytosol, golgi, plasma membrane 79.48 79.64
VIT_01s0011g03490.t01 Wine grape cytosol, golgi, plasma membrane 78.07 78.23
GSMUA_Achr3P02180_001 Banana plasma membrane 54.73 77.05
GSMUA_Achr2P21590_001 Banana golgi, peroxisome, plastid 59.76 76.94
Os03t0220100-01 Rice golgi, mitochondrion 76.46 76.92
EER92628 Sorghum plasma membrane 75.65 76.11
Zm00001d028241_P003 Maize endoplasmic reticulum, golgi, plasma membrane 75.05 75.51
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi, plasma membrane 67.2 75.39
TraesCS4D01G242200.1 Wheat mitochondrion, plasma membrane 74.25 74.4
HORVU4Hr1G067340.2 Barley golgi 74.45 73.85
TraesCS4A01G065300.1 Wheat mitochondrion, plasma membrane 73.44 73.59
GSMUA_Achr3P07400_001 Banana plasma membrane 56.54 72.24
Zm00001d048061_P001 Maize golgi 71.43 71.86
Zm00001d045660_P001 Maize mitochondrion 40.44 69.07
GSMUA_Achr8P30930_001 Banana endoplasmic reticulum, extracellular 53.52 68.91
CDX89699 Canola cytosol 44.47 68.0
Zm00001d037328_P001 Maize cytosol 49.09 66.48
CDY15199 Canola cytosol 44.87 65.59
CDX94721 Canola cytosol 51.11 64.14
CDY47458 Canola cytosol 6.44 64.0
CDY10355 Canola cytosol 31.99 61.63
GSMUA_Achr5P05870_001 Banana plasma membrane 51.11 60.48
KXG30818 Sorghum golgi, mitochondrion 59.15 60.37
TraesCS7A01G205700.1 Wheat golgi 59.56 60.29
Zm00001d051787_P001 Maize mitochondrion 58.55 60.0
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 46.88 59.9
TraesCS7B01G113000.1 Wheat golgi 59.15 59.88
CDY63070 Canola cytosol 44.27 59.78
HORVU0Hr1G038430.1 Barley endoplasmic reticulum, plasma membrane 54.93 59.35
TraesCS7D01G208500.1 Wheat golgi 58.95 59.31
TraesCS1B01G421100.1 Wheat golgi 55.33 59.27
CDX81929 Canola plasma membrane 60.56 59.02
TraesCS4D01G008100.1 Wheat plasma membrane 50.7 58.88
TraesCS4B01G274700.1 Wheat plastid 56.74 58.87
CDY21665 Canola plasma membrane 60.36 58.82
CDX71278 Canola cytosol, peroxisome, plasma membrane 59.96 58.78
EER89559 Sorghum mitochondrion, plasma membrane 57.75 58.57
TraesCS1A01G392800.1 Wheat plasma membrane 54.73 58.49
CDX76286 Canola golgi 55.73 58.44
KXG19727 Sorghum mitochondrion, plastid 57.95 58.42
Zm00001d017941_P001 Maize plasma membrane 57.95 58.42
TraesCS1D01G401000.1 Wheat plasma membrane 54.53 58.41
TraesCS6D01G274600.1 Wheat golgi, plasma membrane 56.74 58.26
CDY46243 Canola golgi 55.53 58.23
CDY46211 Canola cytosol, peroxisome, plasma membrane 59.36 58.19
TraesCS4A01G031500.1 Wheat plasma membrane 56.54 58.18
TraesCS4D01G273400.1 Wheat endoplasmic reticulum 56.54 58.18
Os02t0731900-01 Rice plasma membrane 58.55 58.08
CDY29431 Canola plasma membrane 56.54 58.06
TraesCS6A01G293700.1 Wheat golgi, plasma membrane 56.54 58.06
TraesCS6B01G324200.1 Wheat plasma membrane 56.34 57.85
TraesCS7A01G032900.1 Wheat cytosol 40.24 57.8
HORVU6Hr1G073300.1 Barley golgi, plasma membrane 56.14 57.64
TraesCS7D01G208600.1 Wheat cytosol 43.86 57.07
Os06t0262800-01 Rice plasma membrane 56.54 56.88
CDY26665 Canola cytosol, peroxisome, plasma membrane 56.54 56.77
TraesCS7D01G519300.1 Wheat golgi, plasma membrane 54.33 56.49
TraesCSU01G166100.1 Wheat plasma membrane 55.73 56.3
TraesCS4A01G303900.1 Wheat plasma membrane 55.53 56.1
TraesCS7D01G519400.1 Wheat plasma membrane 53.92 55.95
HORVU7Hr1G006910.1 Barley plasma membrane 54.73 55.85
CDY14892 Canola endoplasmic reticulum, golgi, plastid 58.95 55.7
TraesCS7D01G035700.1 Wheat plasma membrane 54.33 55.67
CDX96912 Canola endoplasmic reticulum, golgi, plastid 58.75 55.41
CDX70186 Canola plastid 57.14 55.36
TraesCS7A01G532300.1 Wheat golgi 53.32 55.32
TraesCS7B01G449300.1 Wheat plasma membrane 53.12 55.23
CDX98800 Canola plastid 57.34 55.02
CDX89834 Canola plasma membrane 57.34 54.7
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 47.08 54.29
KXG19733 Sorghum endoplasmic reticulum, plasma membrane, vacuole 52.52 54.26
TraesCS7B01G449000.1 Wheat golgi 53.12 54.21
CDY18212 Canola plasma membrane 57.14 53.69
HORVU1Hr1G086760.1 Barley cytosol 54.53 53.66
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 47.89 53.48
TraesCS3B01G488500.1 Wheat plasma membrane 52.72 53.47
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 51.31 53.46
TraesCS7D01G209400.1 Wheat cytosol 40.04 53.21
TraesCS7A01G532200.1 Wheat cytosol 11.07 52.88
TraesCS6A01G341400.1 Wheat golgi 53.32 52.68
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 49.9 52.54
TraesCS3D01G444000.1 Wheat golgi 51.51 52.35
TraesCS7D01G029500.1 Wheat plasma membrane 48.09 52.3
TraesCS3A01G279400.1 Wheat plasma membrane 51.31 52.15
Os01t0529800-01 Rice plasma membrane 50.1 52.09
TraesCS6B01G372900.1 Wheat golgi 52.72 52.09
TraesCS6D01G321600.1 Wheat golgi 52.72 52.09
Zm00001d009354_P001 Maize endoplasmic reticulum 50.91 52.06
TraesCS3D01G279300.1 Wheat endoplasmic reticulum, golgi, plasma membrane 50.91 51.95
EES03073 Sorghum endoplasmic reticulum, golgi, plasma membrane 51.11 51.84
EER89567 Sorghum endoplasmic reticulum, golgi, plastid 47.48 51.75
TraesCS3A01G451100.1 Wheat plasma membrane 50.91 51.74
TraesCS2D01G508000.1 Wheat mitochondrion 33.0 51.57
TraesCS7D01G208800.1 Wheat endoplasmic reticulum 50.3 51.55
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 48.09 51.51
TraesCS4A01G456600.1 Wheat plasma membrane 46.88 51.43
TraesCS1A01G037600.1 Wheat endoplasmic reticulum, golgi, plasma membrane 50.5 51.43
TraesCS7D01G102300.1 Wheat mitochondrion 29.98 51.38
HORVU3Hr1G097570.1 Barley golgi 50.5 51.33
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 47.89 51.29
TraesCS7A01G108300.1 Wheat plasma membrane 45.88 50.89
CDX90012 Canola cytosol 54.12 50.85
TraesCS1D01G042300.1 Wheat golgi 48.89 50.84
OQU76197 Sorghum golgi 48.89 50.73
HORVU7Hr1G042050.1 Barley golgi 49.7 50.72
HORVU6Hr1G082270.1 Barley golgi 52.11 50.59
TraesCS7D01G089200.1 Wheat endoplasmic reticulum, plasma membrane 48.09 50.53
CDY17465 Canola plasma membrane 48.29 50.53
HORVU7Hr1G023540.1 Barley mitochondrion 28.97 50.53
TraesCS1A01G040900.1 Wheat golgi 48.49 50.42
HORVU6Hr1G094160.2 Barley endoplasmic reticulum, golgi, plasma membrane 49.7 50.41
Zm00001d044580_P001 Maize mitochondrion 49.3 50.31
TraesCS7A01G206000.1 Wheat golgi 49.9 50.3
HORVU7Hr1G042040.1 Barley golgi 50.1 50.2
TraesCS3B01G313800.1 Wheat endoplasmic reticulum, golgi, plasma membrane 51.11 50.2
TraesCS6B01G373000.1 Wheat endoplasmic reticulum, golgi 42.05 50.12
CDX72475 Canola endoplasmic reticulum, golgi 42.66 50.12
TraesCS7B01G113200.1 Wheat golgi 50.1 50.1
TraesCS1D01G039200.1 Wheat endoplasmic reticulum, golgi, plasma membrane 48.89 50.0
TraesCS7A01G205800.1 Wheat endoplasmic reticulum, golgi, vacuole 45.27 50.0
TraesCS7B01G113100.1 Wheat endoplasmic reticulum, golgi, plasma membrane 45.27 50.0
HORVU6Hr1G004830.1 Barley golgi 49.7 49.8
EER88189 Sorghum endoplasmic reticulum, plasma membrane, vacuole 48.29 49.79
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 50.5 49.6
EES00849 Sorghum endoplasmic reticulum, golgi 49.3 49.6
TraesCS1B01G048000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 48.69 49.59
TraesCS6B01G036000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 48.69 49.59
Os06t0260500-00 Rice mitochondrion 52.52 49.53
CDY49290 Canola endoplasmic reticulum, golgi 41.85 49.17
CDY32443 Canola plasma membrane 47.28 49.16
TraesCS1B01G053700.1 Wheat endoplasmic reticulum 49.09 49.09
Zm00001d044579_P001 Maize golgi 48.69 48.99
TraesCS7D01G208700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 45.47 48.92
CDY49219 Canola endoplasmic reticulum, plasma membrane 44.47 48.79
CDX68323 Canola endoplasmic reticulum, golgi 44.27 48.78
CDY37475 Canola plasma membrane 46.88 48.74
HORVU7Hr1G023280.1 Barley plasma membrane 44.27 48.67
CDY33931 Canola plastid 44.67 48.58
CDY37951 Canola endoplasmic reticulum, plasma membrane 43.86 48.55
CDY05644 Canola plasma membrane, plastid, vacuole 44.47 48.36
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 51.71 48.31
TraesCS2A01G014600.1 Wheat plasma membrane 48.09 48.19
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 43.46 48.11
TraesCS6A01G025200.1 Wheat plasma membrane 47.08 48.05
TraesCS5D01G089800.1 Wheat golgi 47.08 47.85
TraesCS7D01G102900.1 Wheat golgi, plasma membrane, plastid 46.08 47.71
TraesCS5A01G076500.1 Wheat golgi 46.68 47.25
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 52.11 47.18
TraesCS6A01G024400.1 Wheat plasma membrane 46.28 47.03
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 51.71 46.9
TraesCS2D01G508300.1 Wheat endoplasmic reticulum, plasma membrane 43.46 46.85
HORVU7Hr1G022720.1 Barley plasma membrane 33.8 46.8
TraesCS7B01G006100.1 Wheat mitochondrion 45.67 46.61
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 51.11 46.44
TraesCS7B01G006300.1 Wheat golgi 45.47 46.41
TraesCS2B01G535600.1 Wheat golgi, mitochondrion 45.27 46.39
TraesCS4D01G008200.1 Wheat plasma membrane 45.88 46.34
TraesCS7D01G102800.1 Wheat endoplasmic reticulum, plasma membrane, plastid 41.85 46.33
TraesCS2B01G535700.1 Wheat endoplasmic reticulum, plasma membrane 42.66 46.29
TraesCS2D01G508200.1 Wheat plasma membrane, plastid 42.66 46.29
HORVU3Hr1G069880.2 Barley mitochondrion, plastid 49.9 46.27
TraesCS7A01G108000.1 Wheat golgi, plasma membrane, plastid 44.67 46.25
TraesCS7D01G102400.1 Wheat endoplasmic reticulum, plastid, vacuole 44.47 46.04
TraesCS1A01G439000.1 Wheat plasma membrane 46.28 46.0
HORVU5Hr1G087530.1 Barley plasma membrane 44.67 45.68
TraesCS2A01G507700.1 Wheat golgi, plasma membrane 41.85 45.41
HORVU5Hr1G122360.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane, plastid 45.07 45.34
HORVU2Hr1G112840.1 Barley endoplasmic reticulum, golgi 42.66 45.3
TraesCS7D01G102000.1 Wheat mitochondrion, plastid 45.27 45.27
TraesCS7A01G107700.1 Wheat mitochondrion, plastid 44.87 44.87
TraesCS7A01G107900.1 Wheat golgi, mitochondrion 42.45 44.23
HORVU7Hr1G022780.1 Barley golgi, mitochondrion 41.65 43.67
HORVU7Hr1G022580.1 Barley golgi, mitochondrion 31.99 43.56
HORVU7Hr1G030880.1 Barley plasma membrane 43.66 43.49
TraesCS5D01G017000.1 Wheat endoplasmic reticulum, golgi, plastid 41.25 43.43
CDY41551 Canola golgi 48.49 38.31
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 48.69 37.99
CDY49218 Canola plasma membrane 0.6 1.05
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078HXQ3UniProt:A0A078HXQ3InterPro:ACP_syn_III_CEnsemblPlants:CDY42109ProteinID:CDY42109ProteinID:CDY42109.1
InterPro:FAE1_typ3_polyketide_synthGO:GO:0000003GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0006629GO:GO:0006633GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009409GO:GO:0009416GO:GO:0009628
GO:GO:0009856GO:GO:0009922GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0016746GO:GO:0016747GO:GO:0048868EnsemblPlantsGene:GSBRNA2T00074279001InterPro:IPR016039PFAM:PF08392
PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF5MetaCyc:PWY-4381MetaCyc:PWY-5080
MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602
MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-like
UniPathway:UPA00094UniParc:UPI0004EE9580SEG:seg:::
Description
BnaA09g28510D3-ketoacyl-CoA synthase 5 [Source:Projected from Arabidopsis thaliana (AT1G25450) UniProtKB/Swiss-Prot;Acc:Q9C6L5]
Coordinates
chrLK032515:+:84258..86580
Molecular Weight (calculated)
56276.8 Da
IEP (calculated)
9.023
GRAVY (calculated)
-0.042
Length
497 amino acids
Sequence
(BLAST)
001: MSPPKMPDLS TSTKHKYVKL GYQYLVNNFL TLLLIPILAY TALELFRMGP EEILNHLNSL NFNLLHILCS SFLIIFVSTV YFMSKPRTIY LVDYSCFKPP
101: VTCRVPFATF MEHSRLNLID SPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAELVIFTA MDDLFKKTGL KPKDIDILIV NCSLFSPTPS
201: LSAMIINKYK LRSNIKSLNL SGMGCSASLI SVDVARDLLQ VHPNSNAVIV STEIITPNYY QGKERAMLLP NCLFRMGAAA ILLSNRRSDR WRAKYKLCHL
301: VRTHRGAEDK SYYCVYQQED DESHVGINLN KDLMAIAGEA LKSNITTIGP LVLPASEQLL FLTSLIGRKI YNAKWKPYIP DFKMAFEHFC IHAGGRAVID
401: ELQKNLQLSA EHVEASRMTL HRFGNTSSSS LWYELSYIEA KGKMKRGDRV WQIAFGSGFK CNSAVWKSNR TIKTPTEGPW SDCIDRYPVF IPEVVKL
Best Arabidopsis Sequence Match ( AT1G68530.1 )
(BLAST)
001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL
Arabidopsis Description
CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.