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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, cytosol, plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane, plastid
Any Predictor:cytosol, endoplasmic reticulum, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 97.41 97.41
CDX72475 Canola endoplasmic reticulum, golgi 77.8 85.34
CDY49290 Canola endoplasmic reticulum, golgi 77.37 84.87
AT4G34250.1 Thale cress endoplasmic reticulum, golgi 83.19 78.3
CDY10355 Canola cytosol 41.81 75.19
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 77.16 75.05
CDY47458 Canola cytosol 7.54 70.0
CDX89699 Canola cytosol 48.92 69.85
KRH51526 Soybean plasma membrane 59.91 62.75
CDX94721 Canola cytosol 53.23 62.37
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 57.54 61.95
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 58.19 60.67
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 50.43 60.15
CDY15199 Canola cytosol 43.97 60.0
CDY17465 Canola plasma membrane 61.21 59.79
CDY46243 Canola golgi 60.34 59.07
CDX76286 Canola golgi 60.34 59.07
CDY63070 Canola cytosol 46.77 58.97
VIT_03s0063g02640.t01 Wine grape plasma membrane 63.15 58.13
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 63.15 57.91
CDX71278 Canola cytosol, peroxisome, plasma membrane 61.64 56.41
CDY46211 Canola cytosol, peroxisome, plasma membrane 61.42 56.21
Zm00001d009608_P001 Maize plasma membrane 60.99 56.04
CDY21665 Canola plasma membrane 61.42 55.88
Zm00001d039053_P001 Maize plasma membrane 61.85 55.84
Os05t0568000-02 Rice plasma membrane 61.85 55.84
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 55.39 55.63
CDX81929 Canola plasma membrane 60.99 55.49
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 50.43 55.45
CDY29431 Canola plasma membrane 57.76 55.37
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 61.64 55.0
CDY26665 Canola cytosol, peroxisome, plasma membrane 58.19 54.55
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 48.92 54.18
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 61.21 54.1
TraesCS1A01G406200.1 Wheat plasma membrane 60.78 54.02
TraesCS1D01G414600.1 Wheat peroxisome 60.99 53.9
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 54.53 53.72
CDY14892 Canola endoplasmic reticulum, golgi, plastid 59.27 52.28
CDX70186 Canola plastid 57.54 52.05
CDX96912 Canola endoplasmic reticulum, golgi, plastid 59.05 51.99
CDX98800 Canola plastid 57.54 51.54
CDX89834 Canola plasma membrane 57.76 51.44
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 51.72 50.85
CDY18212 Canola plasma membrane 57.33 50.28
CDY04232 Canola plasma membrane 52.16 48.69
CDY07381 Canola plasma membrane 52.16 48.69
HORVU1Hr1G089710.3 Barley plastid 61.21 48.22
CDY42109 Canola plasma membrane 51.29 47.89
CDX90012 Canola cytosol 51.94 45.56
CDY37475 Canola plasma membrane 46.77 45.4
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 43.75 45.21
CDY32443 Canola plasma membrane 46.55 45.19
CDY49219 Canola endoplasmic reticulum, plasma membrane 43.97 45.03
CDY37951 Canola endoplasmic reticulum, plasma membrane 43.53 44.99
CDX68323 Canola endoplasmic reticulum, golgi 42.89 44.12
CDY05644 Canola plasma membrane, plastid, vacuole 41.81 42.45
CDY33931 Canola plastid 41.59 42.23
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 47.41 41.35
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 48.71 41.24
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 48.28 40.95
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 48.06 40.62
CDY41551 Canola golgi 50.86 37.52
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 51.29 37.36
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078BW65InterPro:ACP_syn_III_CEnsemblPlants:CDX69040ProteinID:CDX69040ProteinID:CDX69040.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00130798001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF23MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901InterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EDCA97SEG:seg:
Description
BnaC01g04130D
Coordinates
chrLK031789:+:2605028..2606422
Molecular Weight (calculated)
51994.4 Da
IEP (calculated)
9.589
GRAVY (calculated)
-0.080
Length
464 amino acids
Sequence
(BLAST)
001: MAAIAMKASS LSTQDLHSFY LYLEKKSTSL TMFTISLILG WTLYIMNRPK PVYLVDFSCY LPPSHLKVSV KKIMSHVRVI REQGMWAKTG EHDYLMDFVE
101: KILERSGLGQ ETYIPEGLHC LPLEQTMTGS RKETTDVILG AVDNVLRNTG VSPSDIGILV VNSSTFNPTP SLATIIVNKY KLRDNIKSLN LGGMGCSAGV
201: IAIDVAKSLL QVHRNTYALV VSTENITQNL YLGNNKSMLV TNCLFRVGGA AVLLSNMSRD RKRAKYKLVH TVRVHTGSDD RSYGCATQED DEDGLVGVSL
301: SKDLPMVAAR TLKINIATLG PLVLPIREKL RFFVTFVRKK FFDPKIKHYM PDFKLAFEHF CIHAGGRALI DELEKNLHLS PLHVEASRMT LHRFGNTSSS
401: SIWYELAYTE AKGRMKKGDR IWQIALGSGF KCNSSVWVAL RNVKPSANNP WEDCLHKYPV EIDI
Best Arabidopsis Sequence Match ( AT4G34250.1 )
(BLAST)
001: MDYPMKKVKI FFNYLMAHRF KLCFLPLMVA IAVEASRLST QDLQNFYLYL QNNHTSLTMF FLYLALGSTL YLMTRPKPVY LVDFSCYLPP SHLKASTQRI
101: MQHVRLVREA GAWKQESDYL MDFCEKILER SGLGQETYVP EGLQTLPLQQ NLAVSRIETE EVIIGAVDNL FRNTGISPSD IGILVVNSST FNPTPSLSSI
201: LVNKFKLRDN IKSLNLGGMG CSAGVIAIDA AKSLLQVHRN TYALVVSTEN ITQNLYMGNN KSMLVTNCLF RIGGAAILLS NRSIDRKRAK YELVHTVRVH
301: TGADDRSYEC ATQEEDEDGI VGVSLSKNLP MVAARTLKIN IATLGPLVLP ISEKFHFFVR FVKKKFLNPK LKHYIPDFKL AFEHFCIHAG GRALIDEMEK
401: NLHLTPLDVE ASRMTLHRFG NTSSSSIWYE LAYTEAKGRM TKGDRIWQIA LGSGFKCNSS VWVALRNVKP STNNPWEQCL HKYPVEIDID LKE
Arabidopsis Description
KCS163-ketoacyl-CoA synthase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYZ0]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.