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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, vacuole

Predictor Summary:
  • nucleus 1
  • plastid 2
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid, vacuole
Any Predictor:nucleus, plasma membrane, plastid, vacuole
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33931 Canola plastid 96.5 96.5
AT5G49070.1 Thale cress plasma membrane, vacuole 85.78 84.48
VIT_10s0042g01230.t01 Wine grape endoplasmic reticulum, plasma membrane, plastid 55.36 56.47
CDY10355 Canola cytosol 30.63 54.26
KRH12070 Soybean endoplasmic reticulum, golgi 51.2 53.3
CDY15199 Canola cytosol 39.39 52.94
CDY47458 Canola cytosol 5.69 52.0
CDX89699 Canola cytosol 36.76 51.69
CDY63070 Canola cytosol 40.7 50.54
CDX94721 Canola cytosol 42.45 48.99
CDY49219 Canola endoplasmic reticulum, plasma membrane 45.73 46.14
CDX68323 Canola endoplasmic reticulum, golgi 45.51 46.12
CDY07381 Canola plasma membrane 49.67 45.67
CDY04232 Canola plasma membrane 49.67 45.67
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 44.86 45.66
CDY37951 Canola endoplasmic reticulum, plasma membrane 44.42 45.21
CDY42109 Canola plasma membrane 48.36 44.47
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 40.7 43.16
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 42.45 41.81
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 40.48 41.57
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 43.33 41.51
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 42.01 41.38
CDX76286 Canola golgi 42.89 41.35
CDY46243 Canola golgi 42.67 41.14
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 35.01 41.13
CDX89834 Canola plasma membrane 46.17 40.5
CDY14892 Canola endoplasmic reticulum, golgi, plastid 46.17 40.11
CDX70186 Canola plastid 44.86 39.96
CDY18212 Canola plasma membrane 46.17 39.89
CDX96912 Canola endoplasmic reticulum, golgi, plastid 45.95 39.85
CDX98800 Canola plastid 44.64 39.38
CDY37475 Canola plasma membrane 41.14 39.33
CDY32443 Canola plasma membrane 41.14 39.33
CDX81929 Canola plasma membrane 43.54 39.02
CDY21665 Canola plasma membrane 43.54 39.02
CDY17465 Canola plasma membrane 40.48 38.95
CDX90012 Canola cytosol 44.86 38.75
CDY29431 Canola plasma membrane 40.92 38.64
CDY46211 Canola cytosol, peroxisome, plasma membrane 42.45 38.26
CDX71278 Canola cytosol, peroxisome, plasma membrane 42.45 38.26
CDY49290 Canola endoplasmic reticulum, golgi 35.23 38.06
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 42.01 37.94
CDY26665 Canola cytosol, peroxisome, plasma membrane 40.92 37.78
CDX72475 Canola endoplasmic reticulum, golgi 34.57 37.35
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 38.07 36.86
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 41.58 35.71
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 42.01 35.04
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 41.58 34.73
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 41.36 34.43
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 44.42 31.87
CDY41551 Canola golgi 43.76 31.8
CDY49218 Canola plasma membrane 0.22 0.35
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078EYJ4InterPro:ACP_syn_III_CEnsemblPlants:CDY05644ProteinID:CDY05644ProteinID:CDY05644.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00120629001InterPro:IPR016039PFAM:PF08392PFAM:PF08541
PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF6MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972
MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619
MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094
UniParc:UPI0004EED371SEG:seg::::
Description
BnaC02g38930D
Coordinates
chrLK031963:+:527117..528490
Molecular Weight (calculated)
51566.6 Da
IEP (calculated)
8.991
GRAVY (calculated)
-0.080
Length
457 amino acids
Sequence
(BLAST)
001: MNQTIHKASP ISLTMSELTT LLSSSGFIFE IFISLLVLHL IYQRLGRRVK VYLLDFTCYR APDSNRLPMS TLLETIYLAN QIDQESIDFQ ARILERSWLS
101: NQTSIPPSLT EIPLKKSLTS VQTETMTTIF TSVDDLLKKN KLSPRSIDIL ITNCSLHAPT PSLSAMVINK FHMRSNIKSF NLSGMGCAAG ILSVSLANDL
201: LKVHKGSLAL IVSTEALNTH WYIGKDRSML LTNCLFRMGA AAVLMSSNDQ DRGNAKYELL HVVRTNKAKD DRAYRCIYQD TDSELKQGVS ITKDVITVAG
301: DVLKMNLTTL GPLVLPYIEL FQYVIRKIYK PSSSYRPNFK KAFEHFCIHT GGRAVIQAME MNLNLTEEDI EPSKMTLHRF GNTSSSSVWY ALSYLEAKRR
401: VKRGDKVLQI AFGSGFKCNS AVWRCIREVE PDTDNKWLDF IESYPVDVPD SISIRPC
Best Arabidopsis Sequence Match ( AT5G49070.1 )
(BLAST)
001: MNQTIHRVSP ISMSISELTT LLSSGVSVFE IFAGLLVVHL IYQRIRTRVK VYLLDFTCYR APDSNRVPMS TLIETIYLDD KLDQESIDFQ ARILERSWLS
101: NQTSIPRSLM EIPLKKSLSS VKIETMTTIF TSVEDLLRKN KLSPRSIDIL ITNCSLHSPS PSLSAMVINK FHMRSNIKSF NLSGMGCAAG ILSVNLANDL
201: LQAHRGSLAL IVSTEALNTH WYIGKDRSML LTNCLFRMGA AAVLMSSNDH DRDNAKYELL HVVRKNKAKD DRAYRCIYQD IDSDEKQGVS ITKDVISVAG
301: DMLKMNLTSL GPLVLPYLEQ FQYVIQHILC KKLKIYESNS SYTPNFKTAF EHFCIHTGGR AVIQAMEMNL KLTKVDIEPS KMTLHRFGNT SSSSIWYALS
401: YLEAKRRMKK GDRVLQIAFG SGFKCNSAVW RCIRKVEPNT ENKWLDFIDS YPVDVPDSTN IRPG
Arabidopsis Description
KCS21Probable 3-ketoacyl-CoA synthase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH27]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.