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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, plastid
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007966.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 98.44 98.44
CDY37951 Canola endoplasmic reticulum, plasma membrane 95.77 95.77
AT1G71160.1 Thale cress endoplasmic reticulum, plasma membrane 87.53 85.43
CDX68323 Canola endoplasmic reticulum, golgi 84.86 84.48
CDY49219 Canola endoplasmic reticulum, plasma membrane 84.86 84.11
VIT_12s0034g01840.t01 Wine grape endoplasmic reticulum, golgi 61.02 59.7
KRH10421 Soybean endoplasmic reticulum, plasma membrane 60.13 58.82
CDY15199 Canola cytosol 40.76 53.82
CDY10355 Canola cytosol 30.51 53.1
CDY47458 Canola cytosol 5.79 52.0
CDX89699 Canola cytosol 36.53 50.46
CDX94721 Canola cytosol 42.98 48.74
CDY63070 Canola cytosol 39.2 47.83
CDY33931 Canola plastid 47.22 46.39
CDY05644 Canola plasma membrane, plastid, vacuole 45.66 44.86
CDY04232 Canola plasma membrane 48.78 44.06
CDY07381 Canola plasma membrane 48.55 43.86
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 45.21 43.75
CDY42109 Canola plasma membrane 48.11 43.46
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 44.77 43.32
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 45.66 42.98
CDY46243 Canola golgi 45.21 42.83
CDX76286 Canola golgi 44.99 42.62
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 40.31 42.0
CDY49290 Canola endoplasmic reticulum, golgi 39.42 41.84
CDY21665 Canola plasma membrane 47.22 41.57
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 35.86 41.39
CDX72475 Canola endoplasmic reticulum, golgi 38.98 41.37
CDX81929 Canola plasma membrane 46.77 41.18
CDY17465 Canola plasma membrane 43.43 41.05
CDX71278 Canola cytosol, peroxisome, plasma membrane 46.1 40.83
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 40.31 40.67
CDX90012 Canola cytosol 47.88 40.64
CDY29431 Canola plasma membrane 43.65 40.5
CDY46211 Canola cytosol, peroxisome, plasma membrane 45.66 40.43
CDX70186 Canola plastid 45.88 40.16
CDY37475 Canola plasma membrane 42.54 39.96
CDX96912 Canola endoplasmic reticulum, golgi, plastid 46.77 39.85
CDY32443 Canola plasma membrane 42.32 39.75
CDY14892 Canola endoplasmic reticulum, golgi, plastid 46.55 39.73
CDY26665 Canola cytosol, peroxisome, plasma membrane 43.65 39.6
CDX98800 Canola plastid 45.66 39.58
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 44.54 39.53
CDX89834 Canola plasma membrane 45.66 39.35
CDY18212 Canola plasma membrane 45.88 38.94
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 37.64 35.81
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 42.09 35.53
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 42.54 34.92
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 42.54 34.85
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 42.54 34.79
CDY41551 Canola golgi 42.98 30.68
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 42.98 30.3
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078JL50UniProt:A0A078JL50InterPro:ACP_syn_III_CEnsemblPlants:CDY66107ProteinID:CDY66107ProteinID:CDY66107.1
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00052081001InterPro:IPR016039PFAM:PF08392
PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF20MetaCyc:PWY-4381MetaCyc:PWY-5080
MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602
MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-like
UniPathway:UPA00094UniParc:UPI0004EE58E4SEG:seg:::
Description
BnaA02g35570D3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A078JL50]
Coordinates
chrLK035084:-:17274..18623
Molecular Weight (calculated)
50158.5 Da
IEP (calculated)
8.372
GRAVY (calculated)
-0.096
Length
449 amino acids
Sequence
(BLAST)
001: MDSSSPFINV FQTFMSFPHV ASAFVVIAVF SYYFFRPKCI YLIDFSCYQP PDFLRATVSN FIEHLTISGV FDQESLDLQQ KILERSGIGD GASVPVTVHE
101: IPPNSSLSAA REETHDILFT VVEDLFLKHK IDPKSIDILV SNCSLFCPSP SITSIIINRF GMRSDIKSFS LSGMGCSAGL LSINLVKDLM KIHGDSLALV
201: LSMEAVSPNG YRGKCKSMLI ANTIFRMGGA AILLSNKEQD KLKAKYKLQH LIRTHVGSDN ESYESVMQQI DEEGNVGVAL SKQLVKVASK ALKINVVELG
301: PRVLPYTEQL KYIVSFIKRK WGMQKEVYTP NFKKAFEHFC IHAGGRAIID GVEKHLKLDK EDVEASRSTL HRYGNTSSSS LWYELQYLEA KGRMKKGDRV
401: WQIGFGSGFK SNTAVWKCIS EIDSKDRNAW SDRIHLYPVS GDGSSALET
Best Arabidopsis Sequence Match ( AT1G71160.1 )
(BLAST)
001: MESSFHFINE ALLITQTFIT FHQFLVASAC VLIAVFGYYF FKPRCIIYLI DFSCYQPPDF LRAPVSNFIE HLTISGVFDQ ESLDLQQKIL ERSGISDDAS
101: VPATVHEIPP NASISAAREE THEILFAIVQ DLFSKHEIDP KSIDILVSNC SLFCPSPSIT SMIINKFGMR SDIKSFSLSG MGCSAGILSV NLVKDLMKIH
201: GDSLALVLSM EAVSPNGYRG KCKSMLIANT IFRMGGAAIL LSNRKQDSHK AKYKLQHIIR THVGSDTESY ESVMQQVDEE GKVGVALSKQ LVRVASKALK
301: INVVQLGPRV LPYSEQLKYI ISFIQRKWGM HKEIYTPNFK KAFEHFCIHA GGRAIIEGVE KHLKLDKEDV EASRSTLYRY GNTSSSSLWY ELQYLEAKGR
401: MKMGDKVWQI GFGSGFKANS AVWKCISEID SRGRNAWSDR IHLYPVCGDT SSALKTELLS
Arabidopsis Description
KCS73-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W4M1]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.