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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY63070 Canola cytosol 80.05 86.14
Bra033694.1-P Field mustard golgi, peroxisome, plastid 99.49 74.9
CDY14892 Canola endoplasmic reticulum, golgi, plastid 99.24 74.71
CDX96912 Canola endoplasmic reticulum, golgi, plastid 98.99 74.38
CDY15199 Canola cytosol 63.13 73.53
CDX89699 Canola cytosol 60.1 73.23
AT5G43760.1 Thale cress endoplasmic reticulum, plasma membrane, plastid 96.97 72.59
CDX89834 Canola plasma membrane 94.19 71.59
CDY18212 Canola plasma membrane 94.19 70.51
PGSC0003DMT400042065 Potato cytosol 65.4 69.62
Os11t0591200-01 Rice mitochondrion 73.99 67.82
CDY10355 Canola cytosol 42.42 65.12
CDX70186 Canola plastid 77.53 59.84
PGSC0003DMT400041959 Potato endoplasmic reticulum, golgi, vacuole 65.91 59.45
CDX98800 Canola plastid 77.53 59.27
TraesCS6A01G073300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 75.76 59.06
TraesCS6B01G098300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 76.01 58.67
Zm00001d048953_P001 Maize mitochondrion, plastid 76.01 58.67
TraesCS4D01G148300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 75.51 58.4
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 57.32 58.35
KXG28804 Sorghum plastid 76.77 58.24
TraesCS4A01G164400.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 74.24 57.42
PGSC0003DMT400041960 Potato endoplasmic reticulum, golgi, vacuole 64.14 56.7
CDY47458 Canola cytosol 7.07 56.0
CDX76286 Canola golgi 66.67 55.7
CDY46243 Canola golgi 66.67 55.7
KRH04744 Soybean endoplasmic reticulum, plasma membrane, vacuole 65.15 55.25
TraesCS6D01G071600.1 Wheat cytosol, endoplasmic reticulum, peroxisome, plastid 76.01 55.23
GSMUA_Achr3P15310_001 Banana cytosol, nucleus, plastid 67.42 54.71
KRH57768 Soybean plasma membrane 64.39 54.37
Solyc06g053870.2.1 Tomato mitochondrion 66.41 54.12
PGSC0003DMT400014188 Potato endoplasmic reticulum, golgi, plasma membrane 67.17 53.96
CDX71278 Canola cytosol, peroxisome, plasma membrane 68.94 53.85
CDY46211 Canola cytosol, peroxisome, plasma membrane 68.43 53.45
Solyc05g013220.2.1 Tomato endoplasmic reticulum, golgi, plastid 66.41 53.35
CDY21665 Canola plasma membrane 68.69 53.33
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 62.37 53.23
CDX81929 Canola plasma membrane 68.43 53.14
CDY29431 Canola plasma membrane 64.9 53.1
PGSC0003DMT400042071 Potato plasma membrane 65.4 53.07
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 62.12 53.02
Solyc06g053900.2.1 Tomato cytosol, plasma membrane, plastid 64.9 51.92
CDY07381 Canola plasma membrane 64.65 51.51
CDY26665 Canola cytosol, peroxisome, plasma membrane 64.14 51.31
CDY04232 Canola plasma membrane 64.39 51.31
CDY42109 Canola plasma membrane 64.14 51.11
EES08876 Sorghum cytosol, endoplasmic reticulum, plasma membrane 68.43 50.94
CDY37475 Canola plasma membrane 61.36 50.84
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 61.11 50.73
CDX90012 Canola cytosol 67.68 50.66
CDY32443 Canola plasma membrane 60.61 50.21
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 53.03 48.72
CDY17465 Canola plasma membrane 58.33 48.63
CDY49290 Canola endoplasmic reticulum, golgi 51.52 48.23
CDX72475 Canola endoplasmic reticulum, golgi 51.26 47.99
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 57.07 47.88
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 53.54 47.64
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 59.85 46.84
CDY37951 Canola endoplasmic reticulum, plasma membrane 49.49 43.65
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 60.35 43.61
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 58.59 43.61
CDY49219 Canola endoplasmic reticulum, plasma membrane 49.49 43.27
CDX68323 Canola endoplasmic reticulum, golgi 49.24 43.24
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 59.6 43.14
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 48.74 42.98
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 59.34 42.81
CDY05644 Canola plasma membrane, plastid, vacuole 48.99 42.45
CDY33931 Canola plastid 48.48 42.01
CDY41551 Canola golgi 61.11 38.47
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 61.11 37.99
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078DZX1InterPro:ACP_syn_III_CEnsemblPlants:CDX94721ProteinID:CDX94721ProteinID:CDX94721.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00158110001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF25MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901InterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EE5409SEG:seg:
Description
BnaC07g17300D
Coordinates
chrLK031884:+:244461..247442
Molecular Weight (calculated)
44165.4 Da
IEP (calculated)
9.293
GRAVY (calculated)
-0.205
Length
396 amino acids
Sequence
(BLAST)
001: MDRSQRVGIF TEDNLAFQQK ILERSGLGQK TYFPEALLRV PPNPCMEEAR KEAETVMFGA IDAVLEKTGI KPKDIGILVV NCSLFNPTPS LSAMIVNKYK
101: LRGNILSYNL GGMGCSAGLI SIDLAKQLLQ VQPNSYALVV STENITQNWY LGNDRSMLLS NCIFRMGGAA VLLSNRSSDR RRSKYQLIHT VRTHKGADDN
201: AFGCVYQRED NNAEETGKVG VSLSKNLMAI AGEALKTNIT TLGPLVLPMS EQLLFFATLV ARKVFKVKKI KPYIPDFKLA FEHFCIHAGG RAVLDEIEKN
301: LDLSEWHMEP SRMTLNRFGN TSSSSLWYEL AYSEAKGRIK RGDRTWQIAF GSGFKCNSAV WKALRTIDPV EKSNPWSDEI HEFPVAVPRI TPVTSS
Best Arabidopsis Sequence Match ( AT5G43760.1 )
(BLAST)
001: MSHNQNQPHR PVPVHVTNAE PNPNPNNLPN FLLSVRLKYV KLGYHYLISN ALYILLLPLL AATIANLSSF TINDLSLLYN TLRFHFLSAT LATALLISLS
101: TAYFTTRPRR VFLLDFSCYK PDPSLICTRE TFMDRSQRVG IFTEDNLAFQ QKILERSGLG QKTYFPEALL RVPPNPCMEE ARKEAETVMF GAIDAVLEKT
201: GVKPKDIGIL VVNCSLFNPT PSLSAMIVNK YKLRGNILSY NLGGMGCSAG LISIDLAKQM LQVQPNSYAL VVSTENITLN WYLGNDRSML LSNCIFRMGG
301: AAVLLSNRSS DRSRSKYQLI HTVRTHKGAD DNAFGCVYQR EDNNAEETGK IGVSLSKNLM AIAGEALKTN ITTLGPLVLP MSEQLLFFAT LVARKVFKVK
401: KIKPYIPDFK LAFEHFCIHA GGRAVLDEIE KNLDLSEWHM EPSRMTLNRF GNTSSSSLWY ELAYSEAKGR IKRGDRTWQI AFGSGFKCNS AVWKALRTID
501: PMDEKTNPWI DEIDDFPVQV PRITPITSS
Arabidopsis Description
KCS203-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UE45]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.