Factsheet for PGSC0003DMT400042065

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400042071	Potato	plasma membrane	86.29	65.78
Solyc06g053870.2.1	Tomato	mitochondrion	85.48	65.43
CDX94721	Canola	cytosol	69.62	65.4
CDY63070	Canola	cytosol	61.56	62.23
PGSC0003DMT400014188	Potato	endoplasmic reticulum, golgi, plasma membrane	79.3	59.84
PGSC0003DMT400041959	Potato	endoplasmic reticulum, golgi, vacuole	70.16	59.45
PGSC0003DMT400041960	Potato	endoplasmic reticulum, golgi, vacuole	68.55	56.92
Os11t0591200-01	Rice	mitochondrion	64.78	55.79
PGSC0003DMT400034973	Potato	plasma membrane	70.43	50.48
PGSC0003DMT400015633	Potato	plasma membrane	70.16	50.1
CDX89834	Canola	plasma membrane	69.35	49.52
PGSC0003DMT400019029	Potato	plasma membrane	67.2	49.51
CDY14892	Canola	endoplasmic reticulum, golgi, plastid	69.62	49.24
Bra035992.1-P	Field mustard	plasma membrane	69.35	49.05
Bra033694.1-P	Field mustard	golgi, peroxisome, plastid	69.35	49.05
PGSC0003DMT400037757	Potato	plastid	60.75	49.02
AT5G43760.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	69.62	48.96
Bra015296.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	69.62	48.96
CDX96912	Canola	endoplasmic reticulum, golgi, plastid	69.35	48.96
AT1G04220.1	Thale cress	plasma membrane	69.35	48.86
CDY18212	Canola	plasma membrane	69.35	48.77
PGSC0003DMT400067205	Potato	peroxisome	66.94	48.54
PGSC0003DMT400002734	Potato	cytosol, peroxisome, plasma membrane	66.4	48.34
TraesCS6A01G073300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	65.86	48.23
Zm00001d048953_P001	Maize	mitochondrion, plastid	66.13	47.95
TraesCS6B01G098300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	65.59	47.56
TraesCS4D01G148300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	65.05	47.27
KXG28804	Sorghum	plastid	66.13	47.13
TraesCS4A01G164400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	63.98	46.48
KRH04744	Soybean	endoplasmic reticulum, plasma membrane, vacuole	58.06	46.25
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	61.56	46.17
PGSC0003DMT400032993	Potato	plasma membrane	61.29	45.97
KRH57768	Soybean	plasma membrane	57.26	45.42
PGSC0003DMT400037714	Potato	plasma membrane	59.95	45.14
TraesCS6D01G071600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome, plastid	65.86	44.95
PGSC0003DMT400009451	Potato	cytosol, peroxisome, plasma membrane	62.37	44.7
GSMUA_Achr3P15310_001	Banana	cytosol, nucleus, plastid	57.8	44.06
EES08876	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	62.37	43.61
PGSC0003DMT400028047	Potato	plasma membrane	62.1	43.18
PGSC0003DMT400049683	Potato	endoplasmic reticulum, golgi	49.73	41.57
PGSC0003DMT400051894	Potato	endoplasmic reticulum, plasma membrane	47.58	39.16
PGSC0003DMT400019063	Potato	cytosol, peroxisome, plasma membrane	55.38	38.15

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0016747	InterPro:IPR016039	UniProt:M1BCG1	PFAM:PF08392	PFAM:PF08541	EnsemblPlantsGene:PGSC0003DMG400016315
PGSC:PGSC0003DMG400016315	EnsemblPlants:PGSC0003DMT400042065	PANTHER:PTHR31561	PANTHER:PTHR31561:SF25	SUPFAM:SSF53901	InterPro:Thiolase-like
UniParc:UPI0002955910	SEG:seg	:	:	:	:

Description

Acyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400016315]

Coordinates

chr6:+:40067252..40068487

Molecular Weight (calculated)

41417.3 Da

IEP (calculated)

9.583

GRAVY (calculated)

-0.141

Length

372 amino acids

Sequence
(BLAST)

001: MFQKKILERS GLGDKTYIHN DDNGSSMPFK FSLSSNQYEA KNVIIGAIDD LLMKTTGVKI GDIGIIIVNS SAFNPSPSLC SMIVNHYKLG VNVITYNLTG
101: MGCSAGLISV HLANQLLQGK GNTYALVVST EIISTAFYLG KQRSKLLPNC LFRMGSSAIL LSNRSSDRRC SKYRLMHIVR THKGADDRAY RCAYQEEDED
201: GKKGVTLSKD LMAVAGEALK TNITTLGPLV LPMSEQLLFF ASLIARKVFK RKMKPYIPDF KMAFEHFCIH AGGRAVLDEL QKNLDLPEFL MEPSRMTLYR
301: FGNTSSSSIW YSLAYSEAKG RIKKGDRVWQ IGFGSGFKCN SVVWGALRTV DAAKEKNPWT DEIQDFPVHL PC

Best Arabidopsis Sequence Match ( AT1G01120.1 )
(BLAST)

001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ

Arabidopsis Description

KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.