Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G098300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 93.03 | 98.83 |
| TraesCS4D01G148300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 91.74 | 97.66 |
| TraesCS6A01G073300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 91.01 | 97.64 |
| Os11t0591200-01 | Rice | mitochondrion | 66.79 | 84.26 |
| Zm00001d048953_P001 | Maize | mitochondrion, plastid | 74.5 | 79.14 |
| KXG28804 | Sorghum | plastid | 75.78 | 79.12 |
| CDX94721 | Canola | cytosol | 55.23 | 76.01 |
| CDY63070 | Canola | cytosol | 48.81 | 72.28 |
| VIT_05s0020g04540.t01 | Wine grape | plasma membrane | 65.69 | 68.71 |
| KRH34362 | Soybean | plasma membrane | 65.14 | 68.67 |
| KRG92437 | Soybean | plasma membrane | 64.59 | 68.09 |
| KRH69063 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 64.77 | 67.75 |
| Solyc03g005320.2.1 | Tomato | plasma membrane | 64.4 | 67.63 |
| PGSC0003DMT400034973 | Potato | plasma membrane | 64.22 | 67.44 |
| CDX89834 | Canola | plasma membrane | 64.4 | 67.37 |
| KRH31633 | Soybean | endoplasmic reticulum, nucleus, plastid | 63.85 | 67.31 |
| TraesCS7D01G350500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 64.22 | 67.18 |
| Solyc09g083050.2.1 | Tomato | plasma membrane | 63.12 | 67.06 |
| PGSC0003DMT400015633 | Potato | plasma membrane | 63.3 | 66.22 |
| Bra015296.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 64.22 | 66.16 |
| CDY18212 | Canola | plasma membrane | 64.04 | 65.97 |
| PGSC0003DMT400042065 | Potato | cytosol | 44.95 | 65.86 |
| Bra033694.1-P | Field mustard | golgi, peroxisome, plastid | 63.12 | 65.4 |
| AT1G04220.1 | Thale cress | plasma membrane | 63.12 | 65.15 |
| AT5G43760.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 63.12 | 65.03 |
| CDY14892 | Canola | endoplasmic reticulum, golgi, plastid | 62.75 | 65.02 |
| TraesCS6D01G166600.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 62.39 | 64.89 |
| Bra035992.1-P | Field mustard | plasma membrane | 62.57 | 64.83 |
| CDX96912 | Canola | endoplasmic reticulum, golgi, plastid | 62.57 | 64.71 |
| EES08876 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 62.94 | 64.47 |
| TraesCS1D01G420900.1 | Wheat | peroxisome | 60.18 | 63.2 |
| GSMUA_Achr3P15310_001 | Banana | cytosol, nucleus, plastid | 54.86 | 61.27 |
| PGSC0003DMT400041959 | Potato | endoplasmic reticulum, golgi, vacuole | 48.44 | 60.14 |
| PGSC0003DMT400014188 | Potato | endoplasmic reticulum, golgi, plasma membrane | 52.84 | 58.42 |
| Solyc05g013220.2.1 | Tomato | endoplasmic reticulum, golgi, plastid | 52.84 | 58.42 |
| Solyc06g053870.2.1 | Tomato | mitochondrion | 51.93 | 58.23 |
| PGSC0003DMT400042071 | Potato | plasma membrane | 51.74 | 57.79 |
| TraesCS1D01G414600.1 | Wheat | peroxisome | 55.41 | 57.52 |
| TraesCS4D01G242200.1 | Wheat | mitochondrion, plasma membrane | 52.29 | 57.46 |
| PGSC0003DMT400041960 | Potato | endoplasmic reticulum, golgi, vacuole | 46.97 | 57.14 |
| Solyc06g053900.2.1 | Tomato | cytosol, plasma membrane, plastid | 51.01 | 56.16 |
| TraesCS4D01G277300.1 | Wheat | golgi | 51.38 | 55.01 |
| KRH04744 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 46.79 | 54.6 |
| KRH57768 | Soybean | plasma membrane | 46.05 | 53.52 |
| TraesCS1D01G401000.1 | Wheat | plasma membrane | 45.5 | 53.45 |
| TraesCS6D01G274600.1 | Wheat | golgi, plasma membrane | 46.79 | 52.69 |
| TraesCS1D01G374700.1 | Wheat | plasma membrane | 48.07 | 51.68 |
| TraesCS4D01G226100.1 | Wheat | peroxisome | 50.83 | 51.39 |
| TraesCS7D01G208600.1 | Wheat | cytosol | 35.96 | 51.31 |
| TraesCS7D01G519300.1 | Wheat | golgi, plasma membrane | 44.77 | 51.05 |
| TraesCS7D01G035700.1 | Wheat | plasma membrane | 45.32 | 50.93 |
| TraesCS4D01G008100.1 | Wheat | plasma membrane | 39.63 | 50.47 |
| TraesCS7D01G519400.1 | Wheat | plasma membrane | 44.22 | 50.31 |
| TraesCS2D01G508000.1 | Wheat | mitochondrion | 29.17 | 50.0 |
| TraesCS7D01G209400.1 | Wheat | cytosol | 33.76 | 49.2 |
| TraesCS7D01G029500.1 | Wheat | plasma membrane | 41.1 | 49.02 |
| TraesCS7D01G102300.1 | Wheat | mitochondrion | 26.05 | 48.97 |
| TraesCS7D01G208500.1 | Wheat | golgi | 44.22 | 48.79 |
| TraesCS7D01G089200.1 | Wheat | endoplasmic reticulum, plasma membrane | 42.2 | 48.63 |
| TraesCS4D01G273400.1 | Wheat | endoplasmic reticulum | 42.39 | 47.83 |
| TraesCS1D01G042300.1 | Wheat | golgi | 41.47 | 47.28 |
| TraesCS3D01G444000.1 | Wheat | golgi | 42.39 | 47.24 |
| TraesCS6D01G321600.1 | Wheat | golgi | 42.94 | 46.52 |
| TraesCS4D01G296400.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.69 | 46.11 |
| TraesCS2D01G508200.1 | Wheat | plasma membrane, plastid | 38.35 | 45.63 |
| TraesCS1D01G039200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 40.18 | 45.06 |
| TraesCS7D01G208800.1 | Wheat | endoplasmic reticulum | 40.0 | 44.95 |
| TraesCS5D01G089800.1 | Wheat | golgi | 40.18 | 44.79 |
| TraesCS2D01G508300.1 | Wheat | endoplasmic reticulum, plasma membrane | 37.61 | 44.47 |
| TraesCS7D01G208700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 37.61 | 44.37 |
| TraesCS7D01G102800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 35.23 | 42.76 |
| TraesCS3D01G279300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 38.17 | 42.71 |
| TraesCS7D01G102900.1 | Wheat | golgi, plasma membrane, plastid | 37.61 | 42.71 |
| TraesCS7D01G102000.1 | Wheat | mitochondrion, plastid | 38.53 | 42.25 |
| TraesCS4D01G008200.1 | Wheat | plasma membrane | 37.98 | 42.07 |
| TraesCS7D01G102400.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 36.7 | 41.67 |
| TraesCS5D01G017000.1 | Wheat | endoplasmic reticulum, golgi, plastid | 32.11 | 37.08 |
| TraesCS1D01G420600.2 | Wheat | cytosol | 7.16 | 17.65 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF62 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS6D01G071600 | EnsemblPlants:TraesCS6D01G071600.1 |
| TIGR:cd00831 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:36221975..36225143
Molecular Weight (calculated)
59655.2 Da
IEP (calculated)
10.070
GRAVY (calculated)
-0.122
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MHPGQTLPNP DQPQPPRTHA SRPKVLRTYA TMSAAAQETT AGGGGGDGKR QGPCRPGHLK LGYHIVVSNA VYVLLAPFAA ALALRASRLT PSDLAAARAY
101: LLANLQLAAS LVSVATALAT AYLARRPRAV YLLDFACYKP GPDHVVTRET FMRQSSKAGA FTDDNLAFQR KILERSGLGQ GTYFPAAVLN SPPNPCMAEA
201: RREAEAVMFG AIDSLLAKTG VRARDIGVVV VNCSLFNPTP SLSAMVVNHY KLRGNVASYN LGGMGCSAGL ISIDLAKQLL QVHRNSYALV VSMENITLNW
301: YWGNDRSMLM SNCLFRMGGA AILLSNRAAD KRRSKYQLMH TVRTHHGADD RAYRCVFQEE DKAGRVGVAL SKDLMAVAGE ALKTNITTLG PLVLPMSEQI
401: LFLTSLIGKK IFGLKMKPYI PDFKMAFEHF CIHAGGRAVL DTIEKNLELS DWHMEPSRMT LNRWGNTSSS SLWYELAYTE AKGRVRRGHR AWQIAFGSGF
501: KCNSAVWRAL KDIHPSKEAG SNPWIEEIHR FPVEVPKVES VVSSP
101: LLANLQLAAS LVSVATALAT AYLARRPRAV YLLDFACYKP GPDHVVTRET FMRQSSKAGA FTDDNLAFQR KILERSGLGQ GTYFPAAVLN SPPNPCMAEA
201: RREAEAVMFG AIDSLLAKTG VRARDIGVVV VNCSLFNPTP SLSAMVVNHY KLRGNVASYN LGGMGCSAGL ISIDLAKQLL QVHRNSYALV VSMENITLNW
301: YWGNDRSMLM SNCLFRMGGA AILLSNRAAD KRRSKYQLMH TVRTHHGADD RAYRCVFQEE DKAGRVGVAL SKDLMAVAGE ALKTNITTLG PLVLPMSEQI
401: LFLTSLIGKK IFGLKMKPYI PDFKMAFEHF CIHAGGRAVL DTIEKNLELS DWHMEPSRMT LNRWGNTSSS SLWYELAYTE AKGRVRRGHR AWQIAFGSGF
501: KCNSAVWRAL KDIHPSKEAG SNPWIEEIHR FPVEVPKVES VVSSP
001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
Arabidopsis Description
KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.