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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH34362 Soybean plasma membrane 85.99 86.65
KRG92437 Soybean plasma membrane 85.41 86.07
Solyc09g083050.2.1 Tomato plasma membrane 84.07 85.38
KRH69063 Soybean endoplasmic reticulum, peroxisome, plasma membrane 85.22 85.22
PGSC0003DMT400015633 Potato plasma membrane 84.26 84.26
KRH31633 Soybean endoplasmic reticulum, nucleus, plastid 82.53 83.17
PGSC0003DMT400034973 Potato plasma membrane 82.73 83.04
Solyc03g005320.2.1 Tomato plasma membrane 82.34 82.66
VIT_04s0008g04710.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 76.01 77.5
Os11t0591200-01 Rice mitochondrion 62.38 75.23
TraesCS6A01G073300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 68.91 70.67
TraesCS4D01G148300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 68.71 69.92
TraesCS6B01G098300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 68.71 69.79
Zm00001d048953_P001 Maize mitochondrion, plastid 68.33 69.4
TraesCS4A01G164400.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 67.75 68.95
GSMUA_Achr3P15310_001 Banana cytosol, nucleus, plastid 63.72 68.03
KXG28804 Sorghum plastid 67.95 67.82
VIT_03s0063g02640.t01 Wine grape plasma membrane 64.3 66.47
TraesCS6D01G071600.1 Wheat cytosol, endoplasmic reticulum, peroxisome, plastid 68.71 65.69
VIT_18s0001g12550.t01 Wine grape cytosol, peroxisome, plasma membrane 63.53 65.03
VIT_11s0016g04700.t01 Wine grape plastid 76.58 64.67
VIT_14s0006g02990.t01 Wine grape plasma membrane 59.31 62.8
VIT_15s0048g02720.t01 Wine grape cytosol, peroxisome, plasma membrane 63.72 62.64
VIT_01s0011g03490.t01 Wine grape cytosol, golgi, plasma membrane 59.12 62.1
VIT_07s0141g00090.t01 Wine grape cytosol 50.67 61.54
EES08876 Sorghum cytosol, endoplasmic reticulum, plasma membrane 61.23 59.96
VIT_19s0093g00440.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 54.89 58.13
VIT_07s0141g00070.t01 Wine grape cytosol 42.99 56.0
VIT_07s0141g00030.t01 Wine grape endoplasmic reticulum, extracellular 47.22 55.53
VIT_04s0008g02250.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 54.89 53.96
VIT_07s0141g00060.t01 Wine grape endoplasmic reticulum, plasma membrane 47.41 53.0
VIT_12s0034g01840.t01 Wine grape endoplasmic reticulum, golgi 44.34 50.33
VIT_09s0070g00300.t01 Wine grape cytosol, peroxisome, plasma membrane 47.41 48.81
VIT_10s0042g01230.t01 Wine grape endoplasmic reticulum, plasma membrane, plastid 41.27 47.99
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199EntrezGene:100263066wikigene:100263066InterPro:3-ktacl-CoA_synGene3D:3.40.47.10
MapMan:5.1.6.1.1InterPro:ACP_syn_III_CEMBL:AM455846ProteinID:CAN78895ProteinID:CAN78895.1ProteinID:CCB50487
ProteinID:CCB50487.1UniProt:F6HDW6InterPro:FAE1_typ3_polyketide_synthEMBL:FN595749GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747
InterPro:IPR016039EntrezGene:LOC100263066wikigene:LOC100263066PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417
PANTHER:PTHR31561PANTHER:PTHR31561:SF19SUPFAM:SSF53901TIGR:TC66485TMHMM:TMhelixInterPro:Thiolase-like
UniParc:UPI00015C7CC5ArrayExpress:VIT_05s0020g04540EnsemblPlantsGene:VIT_05s0020g04540EnsemblPlants:VIT_05s0020g04540.t01unigene:Vvi.25293unigene:Vvi.25463
RefSeq:XP_002283935RefSeq:XP_002283935.1SEG:seg:::
Description
3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6HDW6]
Coordinates
chr5:-:6350454..6352416
Molecular Weight (calculated)
58755.3 Da
IEP (calculated)
9.325
GRAVY (calculated)
0.017
Length
521 amino acids
Sequence
(BLAST)
001: MGDEKESLGT SGCVLVQDMG ERGKNKLPNF LLSVRLKYVK LGYHYLISHG MYLLLVPLLG VAAAHLSTLT IKDFLQLWNH LKFNLVTVIL CSALMVFLAT
101: LYFMSRPRKV YLVDFACYKP EKARMCTREI FMERSVLTGT FSEENLAFQK KILERSGLGQ NTYLPEAVLR VPPNPCMAEA RKEAELVMFG AIDQLLAKTG
201: VKAKDIGILV VNCSLFNPTP SLSAMIVNHY KLRGNIMSYN LGGMGCSAGL ISIDLAKQML QVHPNSYALV VSMENITLNW YFGNNRSMLV SNCLFRMGGA
301: AILLSNRSSD RRRSKYQLIH TVRTHKGADD RCYNCVFQEE DETKTIGVAL SKDLMAVAGE ALKTNITTLG PLVLPMSEQL LFFLTLVGRK IFKMKIKPYI
401: PDFKLAFEHF CIHAGGRAVL DELEKNLDLS EWHMEPSRMT LYRFGNTSSS SLWYELAYTE AKGRIRKGDR TWQIAFGSGF KCNSAVWRAI RTIDPVKEKN
501: PWMDEIDEFP VHVPKVASIV T
Best Arabidopsis Sequence Match ( AT2G26640.1 )
(BLAST)
001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI
Arabidopsis Description
KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.