Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G164400.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 97.07 | 97.07 |
| TraesCS6D01G071600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 97.66 | 91.74 |
| Os11t0591200-01 | Rice | mitochondrion | 70.31 | 83.33 |
| Zm00001d048953_P001 | Maize | mitochondrion, plastid | 79.1 | 78.95 |
| KXG28804 | Sorghum | plastid | 80.27 | 78.74 |
| CDX94721 | Canola | cytosol | 58.4 | 75.51 |
| CDY63070 | Canola | cytosol | 51.56 | 71.74 |
| VIT_05s0020g04540.t01 | Wine grape | plasma membrane | 69.92 | 68.71 |
| KRH34362 | Soybean | plasma membrane | 69.34 | 68.67 |
| KRG92437 | Soybean | plasma membrane | 68.75 | 68.09 |
| KRH69063 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 69.14 | 67.95 |
| Solyc03g005320.2.1 | Tomato | plasma membrane | 68.55 | 67.63 |
| PGSC0003DMT400034973 | Potato | plasma membrane | 68.55 | 67.63 |
| KRH31633 | Soybean | endoplasmic reticulum, nucleus, plastid | 68.16 | 67.5 |
| TraesCS7D01G350500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 68.36 | 67.18 |
| CDX89834 | Canola | plasma membrane | 68.36 | 67.18 |
| Solyc09g083050.2.1 | Tomato | plasma membrane | 67.19 | 67.06 |
| PGSC0003DMT400015633 | Potato | plasma membrane | 67.38 | 66.22 |
| Bra015296.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 68.16 | 65.97 |
| CDY18212 | Canola | plasma membrane | 67.97 | 65.78 |
| AT1G04220.1 | Thale cress | plasma membrane | 67.19 | 65.15 |
| PGSC0003DMT400042065 | Potato | cytosol | 47.27 | 65.05 |
| Bra033694.1-P | Field mustard | golgi, peroxisome, plastid | 66.8 | 65.02 |
| TraesCS6D01G166600.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 66.21 | 64.69 |
| AT5G43760.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 66.8 | 64.65 |
| CDY14892 | Canola | endoplasmic reticulum, golgi, plastid | 66.41 | 64.64 |
| Bra035992.1-P | Field mustard | plasma membrane | 66.21 | 64.45 |
| CDX96912 | Canola | endoplasmic reticulum, golgi, plastid | 66.21 | 64.33 |
| EES08876 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 66.6 | 64.1 |
| TraesCS1D01G420900.1 | Wheat | peroxisome | 63.67 | 62.81 |
| GSMUA_Achr3P15310_001 | Banana | cytosol, nucleus, plastid | 58.2 | 61.07 |
| PGSC0003DMT400041959 | Potato | endoplasmic reticulum, golgi, vacuole | 50.98 | 59.45 |
| Solyc06g053870.2.1 | Tomato | mitochondrion | 55.27 | 58.23 |
| PGSC0003DMT400014188 | Potato | endoplasmic reticulum, golgi, plasma membrane | 56.05 | 58.22 |
| Solyc05g013220.2.1 | Tomato | endoplasmic reticulum, golgi, plastid | 55.86 | 58.01 |
| TraesCS4D01G242200.1 | Wheat | mitochondrion, plasma membrane | 56.05 | 57.86 |
| PGSC0003DMT400042071 | Potato | plasma membrane | 55.08 | 57.79 |
| TraesCS1D01G414600.1 | Wheat | peroxisome | 58.79 | 57.33 |
| PGSC0003DMT400041960 | Potato | endoplasmic reticulum, golgi, vacuole | 49.61 | 56.7 |
| Solyc06g053900.2.1 | Tomato | cytosol, plasma membrane, plastid | 53.71 | 55.56 |
| TraesCS4D01G277300.1 | Wheat | golgi | 53.71 | 54.03 |
| KRH04744 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 49.22 | 53.96 |
| TraesCS1D01G401000.1 | Wheat | plasma membrane | 48.24 | 53.23 |
| KRH57768 | Soybean | plasma membrane | 48.63 | 53.09 |
| TraesCS6D01G274600.1 | Wheat | golgi, plasma membrane | 49.8 | 52.69 |
| TraesCS1D01G374700.1 | Wheat | plasma membrane | 51.56 | 52.07 |
| TraesCS4D01G226100.1 | Wheat | peroxisome | 54.3 | 51.58 |
| TraesCS7D01G519300.1 | Wheat | golgi, plasma membrane | 48.05 | 51.46 |
| TraesCS7D01G208600.1 | Wheat | cytosol | 38.09 | 51.05 |
| TraesCS7D01G035700.1 | Wheat | plasma membrane | 48.24 | 50.93 |
| TraesCS4D01G008100.1 | Wheat | plasma membrane | 42.19 | 50.47 |
| TraesCS7D01G519400.1 | Wheat | plasma membrane | 47.07 | 50.31 |
| TraesCS7D01G029500.1 | Wheat | plasma membrane | 44.53 | 49.89 |
| TraesCS2D01G508000.1 | Wheat | mitochondrion | 30.47 | 49.06 |
| TraesCS7D01G209400.1 | Wheat | cytosol | 35.74 | 48.93 |
| TraesCS7D01G102300.1 | Wheat | mitochondrion | 27.54 | 48.62 |
| TraesCS7D01G208500.1 | Wheat | golgi | 46.88 | 48.58 |
| TraesCS7D01G089200.1 | Wheat | endoplasmic reticulum, plasma membrane | 44.53 | 48.2 |
| TraesCS4D01G273400.1 | Wheat | endoplasmic reticulum | 44.92 | 47.62 |
| TraesCS3D01G444000.1 | Wheat | golgi | 45.12 | 47.24 |
| TraesCS1D01G042300.1 | Wheat | golgi | 43.95 | 47.07 |
| TraesCS6D01G321600.1 | Wheat | golgi | 45.7 | 46.52 |
| TraesCS4D01G296400.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.63 | 46.11 |
| TraesCS2D01G508200.1 | Wheat | plasma membrane, plastid | 41.02 | 45.85 |
| TraesCS7D01G208800.1 | Wheat | endoplasmic reticulum | 42.38 | 44.74 |
| TraesCS1D01G039200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 42.38 | 44.65 |
| TraesCS5D01G089800.1 | Wheat | golgi | 42.38 | 44.38 |
| TraesCS2D01G508300.1 | Wheat | endoplasmic reticulum, plasma membrane | 39.84 | 44.25 |
| TraesCS7D01G208700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 39.84 | 44.16 |
| TraesCS7D01G102900.1 | Wheat | golgi, plasma membrane, plastid | 40.04 | 42.71 |
| TraesCS7D01G102800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 37.3 | 42.54 |
| TraesCS3D01G279300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 40.43 | 42.51 |
| TraesCS7D01G102000.1 | Wheat | mitochondrion, plastid | 41.02 | 42.25 |
| TraesCS4D01G008200.1 | Wheat | plasma membrane | 40.23 | 41.87 |
| TraesCS7D01G102400.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 39.06 | 41.67 |
| TraesCS5D01G017000.1 | Wheat | endoplasmic reticulum, golgi, plastid | 34.38 | 37.29 |
| TraesCS1D01G420600.2 | Wheat | cytosol | 7.42 | 17.19 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF62 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS4D01G148300 | EnsemblPlants:TraesCS4D01G148300.1 |
| TIGR:cd00831 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:147079523..147082193
Molecular Weight (calculated)
56349.3 Da
IEP (calculated)
9.962
GRAVY (calculated)
-0.052
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAAHETTA GGGDGKRQGP RRPGYLKLGY HIVVSNAVYV LLAPFAAALA LRASRLTPSD LAAARAYLLA NLQLAVSLVS VATALATVYL ARRPRAVYLL
101: DFACYKPGPD HVVTRETFME QSNKAGVFTD DNLAFQRKIL ERSGLGQGTY FPAAVLNSPP NPCMAEARRE AEAVMFGAID SLLAKTGVRA RDIGVVVVNC
201: SLFNPTPSLS AMVVNHYKLR GNVASYNLGG MGCSAGLISI DLAKQLLQVH RNSYALVVSM ENITLNWYWG NDRSMLMSNC LFRMGGAAIL LSNRAADKRR
301: SKYQLVHTVR THHGTDDRAY RCVFQEEDKA GRVGVALSKD LMAVAGEALK TNITTLAPLV LPMSEQILFL TSLIGKKIFG LKMKPYIPDF KMAFEHFCIH
401: AGGRAVLDTI EKNLELSDWH MEPSRMTLNR WGNTSSSSLW YELAYTEAKG RVRRGHRAWQ IAFGSGFKCN SAVWRALKDI HPSKEARSNP WIEEIHRFPV
501: EVPKVESVVS SP
101: DFACYKPGPD HVVTRETFME QSNKAGVFTD DNLAFQRKIL ERSGLGQGTY FPAAVLNSPP NPCMAEARRE AEAVMFGAID SLLAKTGVRA RDIGVVVVNC
201: SLFNPTPSLS AMVVNHYKLR GNVASYNLGG MGCSAGLISI DLAKQLLQVH RNSYALVVSM ENITLNWYWG NDRSMLMSNC LFRMGGAAIL LSNRAADKRR
301: SKYQLVHTVR THHGTDDRAY RCVFQEEDKA GRVGVALSKD LMAVAGEALK TNITTLAPLV LPMSEQILFL TSLIGKKIFG LKMKPYIPDF KMAFEHFCIH
401: AGGRAVLDTI EKNLELSDWH MEPSRMTLNR WGNTSSSSLW YELAYTEAKG RVRRGHRAWQ IAFGSGFKCN SAVWRALKDI HPSKEARSNP WIEEIHRFPV
501: EVPKVESVVS SP
001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
Arabidopsis Description
KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.