Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015296.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 99.42 97.92
CDY18212 Canola plasma membrane 98.66 97.16
CDX94721 Canola cytosol 71.59 94.19
AT1G04220.1 Thale cress plasma membrane 93.28 92.05
CDY63070 Canola cytosol 64.3 91.03
CDY14892 Canola endoplasmic reticulum, golgi, plastid 87.91 87.07
CDX96912 Canola endoplasmic reticulum, golgi, plastid 87.72 86.72
CDY15199 Canola cytosol 47.79 73.24
CDX89699 Canola cytosol 45.49 72.92
Os11t0591200-01 Rice mitochondrion 60.27 72.69
CDX70186 Canola plastid 69.29 70.37
CDX98800 Canola plastid 69.1 69.5
PGSC0003DMT400042065 Potato cytosol 49.52 69.35
TraesCS6A01G073300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 67.56 69.29
TraesCS6B01G098300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 67.37 68.42
TraesCS4D01G148300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 67.18 68.36
TraesCS4A01G164400.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 66.03 67.19
Zm00001d048953_P001 Maize mitochondrion, plastid 65.07 66.08
KXG28804 Sorghum plastid 65.83 65.71
PGSC0003DMT400014188 Potato endoplasmic reticulum, golgi, plasma membrane 61.61 65.11
Solyc05g013220.2.1 Tomato endoplasmic reticulum, golgi, plastid 61.61 65.11
CDY10355 Canola cytosol 32.05 64.73
TraesCS6D01G071600.1 Wheat cytosol, endoplasmic reticulum, peroxisome, plastid 67.37 64.4
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 47.6 63.75
PGSC0003DMT400042071 Potato plasma membrane 59.69 63.73
GSMUA_Achr3P15310_001 Banana cytosol, nucleus, plastid 59.5 63.52
CDX81929 Canola plasma membrane 62.0 63.33
PGSC0003DMT400041959 Potato endoplasmic reticulum, golgi, vacuole 53.36 63.33
CDY21665 Canola plasma membrane 61.8 63.14
CDX71278 Canola cytosol, peroxisome, plasma membrane 61.42 63.12
CDY29431 Canola plasma membrane 58.35 62.81
CDY46211 Canola cytosol, peroxisome, plasma membrane 61.04 62.72
Solyc06g053870.2.1 Tomato mitochondrion 58.35 62.55
CDX76286 Canola golgi 56.62 62.24
CDY46243 Canola golgi 56.43 62.03
CDY26665 Canola cytosol, peroxisome, plasma membrane 58.73 61.82
PGSC0003DMT400041960 Potato endoplasmic reticulum, golgi, vacuole 52.02 60.49
Solyc06g053900.2.1 Tomato cytosol, plasma membrane, plastid 56.43 59.39
CDY07381 Canola plasma membrane 56.05 58.75
KRH04744 Soybean endoplasmic reticulum, plasma membrane, vacuole 52.59 58.67
CDY04232 Canola plasma membrane 55.47 58.15
CDY47458 Canola cytosol 5.57 58.0
KRH57768 Soybean plasma membrane 52.02 57.78
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 51.44 57.76
EES08876 Sorghum cytosol, endoplasmic reticulum, plasma membrane 58.93 57.71
CDX90012 Canola cytosol 58.54 57.66
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 52.02 57.42
CDY42109 Canola plasma membrane 54.7 57.34
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 50.67 56.9
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 52.02 56.81
CDY37475 Canola plasma membrane 51.06 55.65
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 45.87 55.45
CDY32443 Canola plasma membrane 50.67 55.23
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 47.02 55.06
CDY17465 Canola plasma membrane 50.1 54.95
CDX72475 Canola endoplasmic reticulum, golgi 43.57 53.66
CDY49290 Canola endoplasmic reticulum, golgi 43.38 53.43
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 51.06 52.57
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 54.32 51.64
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 52.4 51.32
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 53.36 50.82
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 53.17 50.46
CDY49219 Canola endoplasmic reticulum, plasma membrane 40.31 46.36
CDY37951 Canola endoplasmic reticulum, plasma membrane 39.92 46.33
CDY05644 Canola plasma membrane, plastid, vacuole 40.5 46.17
CDY33931 Canola plastid 40.31 45.95
CDX68323 Canola endoplasmic reticulum, golgi 39.73 45.9
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 39.35 45.66
CDY41551 Canola golgi 50.86 42.13
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 50.86 41.6
CDY49218 Canola plasma membrane 0.38 0.7
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078DMR8InterPro:ACP_syn_III_CEnsemblPlants:CDX89834ProteinID:CDX89834ProteinID:CDX89834.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00150291001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF25MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EED596SEG:seg
Description
BnaA10g02480D
Coordinates
chrLK031861:+:316175..319523
Molecular Weight (calculated)
58796.5 Da
IEP (calculated)
9.519
GRAVY (calculated)
-0.061
Length
521 amino acids
Sequence
(BLAST)
001: MNENHIQITT VDVTNQKLPN FLLSVRLKYV KLGYHYLISN AVYIILLPVL FAATSSSFKL SDLTLLCNHL LHFHLLPSTL FATLLIFLTT LYFTTRPRKV
101: FLLDFACYKP DPSLICTRET FMDRSQRVGI FTEDNLAFQQ KILERSGLGQ KTYFPEALLR VPPNPCMSEA RKEAETVMFG AIDAVLEKTG VKPKDIGILV
201: VNCSLFNPTP SLSAMIVNKY KLRGNILSYN LGGMGCSAGL ISIDLAKQLL QVQANSYALV VSTENITLNW YLGNDRSMLL SNCIFRMGGA AVLLSNRSSD
301: RRRSKYQLIH TVRTHKGADD NAFNCVYQRE DNNDNNKIGV SLSKNLMAIA GEALKTNITT LGPLVLPMSE QLLFFMTLVA RKVFKVKKIK PYIPDFKLAF
401: EHFCIHAGGR AVLDEIEKNL DLSEWHMEPS RMTLNRFGNT SSSSLWYELA YSEAKGRIKR GDRTWQIAFG SGFKCNSAVW RALKNIDPSK EEKTNPWIDE
501: IHEFPVQVPR VSLVSSSSES R
Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)
001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
Arabidopsis Description
KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.