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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031081.1-P Field mustard plasma membrane 99.41 99.22
CDX81929 Canola plasma membrane 98.04 98.04
CDY29431 Canola plasma membrane 87.65 92.36
AT1G19440.1 Thale cress golgi, peroxisome, plasma membrane 92.75 91.67
CDY26665 Canola cytosol, peroxisome, plasma membrane 88.63 91.31
CDX89699 Canola cytosol 53.53 84.0
PGSC0003DMT400009451 Potato cytosol, peroxisome, plasma membrane 83.33 81.89
Solyc04g080450.1.1 Tomato golgi, peroxisome, plasma membrane 82.94 81.82
KRH15203 Soybean plasma membrane 78.63 78.63
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 59.8 78.41
KRH05829 Soybean cytosol, peroxisome, plasma membrane 78.82 78.36
Zm00001d009608_P001 Maize plasma membrane 76.67 77.43
CDX71278 Canola cytosol, peroxisome, plasma membrane 76.86 77.32
Os05t0568000-02 Rice plasma membrane 77.65 77.04
CDY46211 Canola cytosol, peroxisome, plasma membrane 76.27 76.73
Zm00001d039053_P001 Maize plasma membrane 77.25 76.65
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 69.22 76.41
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 77.65 76.15
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 61.76 74.64
TraesCS1A01G406200.1 Wheat plasma membrane 76.08 74.33
TraesCS1D01G414600.1 Wheat peroxisome 76.47 74.29
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 76.27 74.1
CDY47458 Canola cytosol 7.25 74.0
CDY10355 Canola cytosol 37.06 73.26
CDY46243 Canola golgi 67.84 73.0
CDX76286 Canola golgi 67.84 73.0
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 65.69 71.13
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 56.67 68.97
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 63.73 68.86
CDX94721 Canola cytosol 53.33 68.69
HORVU1Hr1G089710.3 Barley plastid 76.47 66.21
CDY15199 Canola cytosol 43.92 65.88
CDX70186 Canola plastid 66.08 65.69
CDX98800 Canola plastid 65.49 64.48
CDY63070 Canola cytosol 46.27 64.13
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 55.88 64.04
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 53.53 63.34
CDY17465 Canola plasma membrane 58.63 62.95
CDY07381 Canola plasma membrane 60.59 62.17
CDX89834 Canola plasma membrane 63.14 61.8
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 57.65 61.64
CDY04232 Canola plasma membrane 60.0 61.57
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.88 61.42
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 55.88 61.42
CDY14892 Canola endoplasmic reticulum, golgi, plastid 63.14 61.22
CDX96912 Canola endoplasmic reticulum, golgi, plastid 62.94 60.91
CDY18212 Canola plasma membrane 62.94 60.68
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 60.0 60.47
CDY42109 Canola plasma membrane 58.82 60.36
CDX72475 Canola endoplasmic reticulum, golgi 49.61 59.81
CDY49290 Canola endoplasmic reticulum, golgi 49.41 59.57
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 56.86 54.51
CDX90012 Canola cytosol 55.88 53.88
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 57.45 53.47
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 57.06 53.01
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 56.67 52.83
CDY32443 Canola plasma membrane 49.22 52.51
CDY37475 Canola plasma membrane 49.02 52.3
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 41.57 47.22
CDY37951 Canola endoplasmic reticulum, plasma membrane 41.57 47.22
CDY49219 Canola endoplasmic reticulum, plasma membrane 41.37 46.58
CDX68323 Canola endoplasmic reticulum, golgi 40.59 45.9
CDY33931 Canola plastid 39.02 43.54
CDY05644 Canola plasma membrane, plastid, vacuole 39.02 43.54
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 50.98 40.82
CDY41551 Canola golgi 50.2 40.7
CDY49218 Canola plasma membrane 0.39 0.7
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078G5C2UniProt:A0A078G5C2InterPro:ACP_syn_III_CEnsemblPlants:CDY21665ProteinID:CDY21665ProteinID:CDY21665.1
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00016150001InterPro:IPR016039PFAM:PF08392
PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF65MetaCyc:PWY-4381MetaCyc:PWY-5080
MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602
MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-like
UniPathway:UPA00094UniParc:UPI0004EEA8E4SEG:seg:::
Description
BnaA09g44160D3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A078G5C2]
Coordinates
chrLK032123:-:55100..57097
Molecular Weight (calculated)
56995.3 Da
IEP (calculated)
9.128
GRAVY (calculated)
-0.020
Length
510 amino acids
Sequence
(BLAST)
001: MDGARGSNGD GSVGVQIRQT RILPDFLQSV NLKYVKLGYH YVISNLLALC LLPLAVVISV EVSQTDPEDL RQLWIHLQYN LVSIIACSAV LVFGLTVYVM
101: TRPRPIYLVD FSCYLPPDHL KVPVSRFMNH STLTGDFDES SLEFQRKILE RSGLGEDTYL PEAMHHVPPT ISMAAAREEA EQVMFGALDK LFANTNVKAK
201: DIGVLVVNCS LFNPTPSLSA MIVNKYKLRG NIRSYNLGGM GCSAGVIAVD LAKDMLLVHR NTYAVVVSTE NITQNWYFGN KKAMLIPNCL FRVGGSAVLL
301: SNKSRDKRRS KYRLSHVVRT HRGADDKAFR CVYQEQDDTG RTGVSLSKEL MAIAGETLKT NITTLGPLVL PISEQILFFV TLVVKKLFNG KVKPYIPDFK
401: LAFEHFCIHA GGRAVIDELE KNLQLSPVHV EASRMTLHRF GNTSSSSIWY ELAYIEAKGR MRRGNRVWQI AFGSGFKCNS AVWEALRNVK PSKDSPWEDC
501: IDKYPVTLSC
Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.