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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plastid
 plasma membrane: 23508561
plasma membrane: 27341663
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 23508561 doi
Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck
Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d009608_P001 Maize plasma membrane 93.77 95.45
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 96.5 95.38
Os05t0568000-02 Rice plasma membrane 91.05 91.05
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 90.47 88.57
TraesCS1A01G406200.1 Wheat plasma membrane 89.88 88.51
TraesCS1D01G414600.1 Wheat peroxisome 90.27 88.38
CDX89699 Canola cytosol 51.95 82.15
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 65.76 80.09
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 71.01 79.0
HORVU1Hr1G089710.3 Barley plastid 90.27 78.78
VIT_18s0001g12550.t01 Wine grape cytosol, peroxisome, plasma membrane 77.04 77.8
Solyc04g080450.1.1 Tomato golgi, peroxisome, plasma membrane 78.02 77.56
Bra025738.1-P Field mustard plasma membrane 76.26 77.47
CDX81929 Canola plasma membrane 76.85 77.45
Bra037304.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 68.68 77.41
Bra031081.1-P Field mustard plasma membrane 76.85 77.3
CDY29431 Canola plasma membrane 72.76 77.27
PGSC0003DMT400009451 Potato cytosol, peroxisome, plasma membrane 78.02 77.26
CDY21665 Canola plasma membrane 76.65 77.25
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 58.17 76.86
KRH51526 Soybean plasma membrane 66.15 76.75
CDY26665 Canola cytosol, peroxisome, plasma membrane 73.54 76.36
AT1G19440.1 Thale cress golgi, peroxisome, plasma membrane 76.65 76.36
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 69.84 76.22
KRH15203 Soybean plasma membrane 74.9 75.49
KRH05829 Soybean cytosol, peroxisome, plasma membrane 75.29 75.44
CDX71278 Canola cytosol, peroxisome, plasma membrane 73.93 74.95
CDY46211 Canola cytosol, peroxisome, plasma membrane 73.93 74.95
Bra001974.1-P Field mustard cytosol, peroxisome, plasma membrane 73.74 74.75
AT2G16280.1 Thale cress golgi, peroxisome, plasma membrane 74.32 74.61
CDY47458 Canola cytosol 7.2 74.0
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 57.78 70.88
CDX76286 Canola golgi 64.79 70.25
CDY10355 Canola cytosol 35.21 70.16
CDY46243 Canola golgi 64.59 70.04
AT4G34510.1 Thale cress plasma membrane 65.95 69.61
Bra034634.1-P Field mustard golgi 64.01 69.41
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 63.03 68.64
Zm00001d016438_P001 Maize endoplasmic reticulum, peroxisome, plasma membrane 68.29 67.89
Zm00001d039094_P001 Maize cytosol 66.54 67.19
Zm00001d048061_P001 Maize golgi 64.01 66.6
Zm00001d046444_P001 Maize plasma membrane 66.54 66.41
Zm00001d028241_P003 Maize endoplasmic reticulum, golgi, plasma membrane 63.62 66.19
Zm00001d045660_P001 Maize mitochondrion 35.6 62.89
Bra036405.1-P Field mustard cytosol, plasma membrane, plastid 56.23 62.69
AT2G15090.1 Thale cress golgi 57.98 61.95
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 55.84 61.85
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.64 61.64
Bra017641.1-P Field mustard golgi 57.78 61.62
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 51.56 61.48
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 56.81 61.22
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 52.72 60.9
CDX72475 Canola endoplasmic reticulum, golgi 49.81 60.52
AT4G34250.1 Thale cress endoplasmic reticulum, golgi 57.78 60.24
CDY17465 Canola plasma membrane 55.45 60.0
Zm00001d037328_P001 Maize cytosol 42.61 59.67
CDY49290 Canola endoplasmic reticulum, golgi 49.03 59.57
Bra013081.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 56.42 59.55
AT4G34520.1 Thale cress golgi 58.37 59.29
Zm00001d048953_P001 Maize mitochondrion, plastid 58.95 59.06
Bra034635.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 57.98 58.89
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 57.59 58.5
Zm00001d027904_P001 Maize plastid 59.92 56.72
Zm00001d030343_P001 Maize cytosol, peroxisome, plasma membrane 57.59 55.33
Zm00001d051787_P001 Maize mitochondrion 50.97 54.02
Zm00001d028406_P001 Maize peroxisome 56.03 52.65
Zm00001d047931_P001 Maize peroxisome 55.84 52.56
Zm00001d017941_P001 Maize plasma membrane 49.81 51.93
Zm00001d032948_P001 Maize endoplasmic reticulum, golgi, plasma membrane 48.25 50.1
Zm00001d014168_P001 Maize peroxisome, plasma membrane, plastid 48.25 49.11
Zm00001d027766_P001 Maize mitochondrion 48.25 46.88
Zm00001d009354_P001 Maize endoplasmic reticulum 43.39 45.88
Zm00001d044579_P001 Maize golgi 43.58 45.34
Zm00001d044580_P001 Maize mitochondrion 42.8 45.17
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1UniProt:A0A1D6MD71
InterPro:ACP_syn_III_CProteinID:AQK88622.1InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747InterPro:IPR016039
PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF65SUPFAM:SSF53901
TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI0002213D86EnsemblPlantsGene:Zm00001d039053EnsemblPlants:Zm00001d039053_P001EnsemblPlants:Zm00001d039053_T001
SEG:seg:::::
Description
3-ketoacyl-CoA synthase
Coordinates
chr6:-:169331804..169333348
Molecular Weight (calculated)
57037.4 Da
IEP (calculated)
9.537
GRAVY (calculated)
-0.008
Length
514 amino acids
Sequence
(BLAST)
001: MNGGAAPPSA AAAATPPHRR LPDFLQSVNL KYVKLGYHYL ITHLLTLMLL PLMAVILLEA GRTDPEDLRQ LWLHLQYNLV SVLVLSAVLV FGATVYVLTR
101: PRPVYLVDFA CYKPPAHLQV RFEEFMRHSK LCGFSDDALE FQRKILERSG LSEETYVPEA MHALPPQPTM ANARAEAETV MFGALDSLFR STGVRPKDVG
201: VLVVNCSLFN PTPSLSAMIV NKYKLRGNVR SFNLGGMGCS AGVIAVDLAR DMLQVHRGTY AVVVSTENIT QNWYFGNRKS MLIPNCLFRV GGAAVLLSNR
301: GGDRRRAKYV LRHVVRTHKG ADDRAFNCVY QEQDGEGKTG VSLSKDLMAI AGGALKTNIT TLGPLVLPVS EQLLFFATLV AKKLLVSAKT KPYIPDFKLA
401: FEHFCIHAGG RAVIDELEKN LQLSPAHVEA SRMTLHRFGN TSSSSIWYEL AYMEAKGRVR RGHRVWQIAF GSGFKCNSAV WHALRNVKPS PDSPWEDCID
501: RYPVELVDGF PAHQ
Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.