Factsheet for Zm00001d051787_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30818	Sorghum	golgi, mitochondrion	94.85	94.46
Zm00001d017941_P001	Maize	plasma membrane	94.43	92.9
TraesCS6A01G293700.1	Wheat	golgi, plasma membrane	86.19	86.36
Os02t0731900-01	Rice	plasma membrane	89.07	86.23
TraesCS6D01G274600.1	Wheat	golgi, plasma membrane	85.98	86.16
HORVU6Hr1G073300.1	Barley	golgi, plasma membrane	85.77	85.95
TraesCS6B01G324200.1	Wheat	plasma membrane	85.57	85.74
Zm00001d045660_P001	Maize	mitochondrion	51.34	85.57
Zm00001d037328_P001	Maize	cytosol	64.33	85.01
TraesCS1B01G421100.1	Wheat	golgi	77.53	81.03
TraesCS1D01G401000.1	Wheat	plasma membrane	77.32	80.82
TraesCS1A01G392800.1	Wheat	plasma membrane	77.32	80.65
HORVU1Hr1G086760.1	Barley	cytosol	77.32	74.26
Zm00001d028241_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	63.09	61.94
Zm00001d048061_P001	Maize	golgi	62.89	61.74
Zm00001d009354_P001	Maize	endoplasmic reticulum	61.86	61.73
KRH35956	Soybean	plasma membrane	62.47	61.09
KRG90814	Soybean	cytosol, golgi, plasma membrane	62.06	60.69
Solyc02g085870.2.1	Tomato	plasma membrane	61.24	59.88
VIT_14s0006g02990.t01	Wine grape	plasma membrane	60.62	59.76
Zm00001d044580_P001	Maize	mitochondrion	60.0	59.75
PGSC0003DMT400032993	Potato	plasma membrane	61.03	59.68
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	60.62	59.27
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	60.62	59.27
GSMUA_Achr3P07400_001	Banana	plasma membrane	47.42	59.13
Zm00001d044579_P001	Maize	golgi	60.21	59.11
PGSC0003DMT400037757	Potato	plastid	56.08	59.0
CDY42109	Canola	plasma membrane	60.0	58.55
Bra024749.1-P	Field mustard	plasma membrane	60.0	58.55
Bra004034.1-P	Field mustard	plasma membrane	59.38	58.54
CDY04232	Canola	plasma membrane	59.79	58.35
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	59.59	58.27
CDY07381	Canola	plasma membrane	59.59	58.15
AT1G25450.1	Thale cress	plasma membrane	58.76	57.93
AT1G68530.1	Thale cress	plasma membrane	59.18	57.75
Solyc02g063140.2.1	Tomato	golgi	58.97	57.66
PGSC0003DMT400037714	Potato	plasma membrane	58.35	57.29
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	57.94	56.88
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	55.46	54.67
GSMUA_Achr5P05870_001	Banana	plasma membrane	47.22	54.52
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	57.53	53.76
Zm00001d009608_P001	Maize	plasma membrane	54.64	52.48
Zm00001d039053_P001	Maize	plasma membrane	54.02	50.97
Zm00001d016438_P001	Maize	endoplasmic reticulum, peroxisome, plasma membrane	53.61	50.29
Zm00001d039094_P001	Maize	cytosol	51.96	49.51
Zm00001d048953_P001	Maize	mitochondrion, plastid	51.13	48.34
Zm00001d046444_P001	Maize	plasma membrane	50.72	47.77
Zm00001d027766_P001	Maize	mitochondrion	50.1	45.94
Zm00001d030343_P001	Maize	cytosol, peroxisome, plasma membrane	50.1	45.42
Zm00001d032948_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	45.15	44.24
Zm00001d014168_P001	Maize	peroxisome, plasma membrane, plastid	45.77	43.96
Zm00001d047931_P001	Maize	peroxisome	48.66	43.22
Zm00001d028406_P001	Maize	peroxisome	48.66	43.14
Zm00001d027904_P001	Maize	plastid	45.36	40.52

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	EntrezGene:100191738	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1
InterPro:ACP_syn_III_C	ProteinID:AQK55120.1	UniProt:B4F9Z5	EMBL:BT033933	EMBL:BT039280	InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417
PANTHER:PTHR31561	PANTHER:PTHR31561:SF12	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI00017B60E3
EnsemblPlantsGene:Zm00001d051787	EnsemblPlants:Zm00001d051787_P001	EnsemblPlants:Zm00001d051787_T001	SEG:seg	:	:

Description

3-ketoacyl-CoA synthase

Coordinates

chr4:+:169781767..169783224

Molecular Weight (calculated)

53516.1 Da

IEP (calculated)

8.834

GRAVY (calculated)

0.078

Length

485 amino acids

Sequence
(BLAST)

001: MGSSAQLRRL KPLYQLVVNN ILTIVAVPLA AAVLLKAAEL GPEEILARAR ALRPAHMLLA GFLPAVATVL YLTLRPRAVY LVDYACFRTN PNCRVPFATF
101: LEHSRVWPGF DERSVRFMTR LLERSGLGEE TCLPYAQHYI PPSRDLESSR AEAELVIFSA IDDLLAKTGV SPQDIDILVV NCSLFAPTPS FADMVMRRYG
201: LRGDVRSVHL AGMGCSAGLI SVELARNLLQ VAPRGARALV VSTETITPNY YMGKERAMLL PNCLFRMGGA AALLSTDGAG ARFRLARVVR TLRGASDAAY
301: RCVYQEEDER GNVGINLSKD LMSIAGDALK ANITAMGPLV LPASEQLLFA LSFIARKVLN DRVKPYIPDF RTAFEHFCIH AGGRAVIDEL QRSLTLSDEQ
401: VEASRMTLHR FGNTSSSSLW YELAYIEAKG RMRRGDRVWM IGFGSGFKCN SAAWECIRPA ANADDGPWAN CIHRYPVHIP DVLKH

Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)

001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY

Arabidopsis Description

KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.