Factsheet for Zm00001d014168_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, plasma membrane

Predictor Summary:

mitochondrion 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, plastid
Any Predictor:	mitochondrion, peroxisome, secretory
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032948_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	88.32	90.1
EER91618	Sorghum	plastid	90.69	87.4
Os10t0416200-01	Rice	cytosol, mitochondrion	78.42	75.72
TraesCS6A01G415500.2	Wheat	mitochondrion	73.66	73.66
TraesCS6B01G473900.1	Wheat	mitochondrion	73.07	73.21
Zm00001d027766_P001	Maize	mitochondrion	65.74	62.76
Zm00001d045660_P001	Maize	mitochondrion	34.26	59.45
GSMUA_Achr6P23320_001	Banana	endoplasmic reticulum, golgi, vacuole	44.16	55.89
Zm00001d037328_P001	Maize	cytosol	39.41	54.22
Zm00001d039094_P001	Maize	cytosol	54.46	54.03
Zm00001d048953_P001	Maize	mitochondrion, plastid	54.85	54.0
Zm00001d016438_P001	Maize	endoplasmic reticulum, peroxisome, plasma membrane	53.86	52.61
Zm00001d046444_P001	Maize	plasma membrane	53.47	52.43
Zm00001d048061_P001	Maize	golgi	48.91	50.0
Zm00001d009608_P001	Maize	plasma membrane	49.9	49.9
Zm00001d028241_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	47.92	48.99
Zm00001d039053_P001	Maize	plasma membrane	49.11	48.25
Zm00001d030343_P001	Maize	cytosol, peroxisome, plasma membrane	49.11	46.36
Zm00001d051787_P001	Maize	mitochondrion	43.96	45.77
Zm00001d017941_P001	Maize	plasma membrane	43.96	45.03
Zm00001d028406_P001	Maize	peroxisome	48.32	44.61
Zm00001d047931_P001	Maize	peroxisome	47.72	44.14
Zm00001d044580_P001	Maize	mitochondrion	41.19	42.71
Zm00001d009354_P001	Maize	endoplasmic reticulum	40.59	42.18
Zm00001d044579_P001	Maize	golgi	40.0	40.89
Zm00001d027904_P001	Maize	plastid	43.17	40.15

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	EntrezGene:103626218	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1
UniProt:A0A1D6GQJ7	InterPro:ACP_syn_III_C	ProteinID:AQK65410.1	ncoils:Coil	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF16	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI00022182F4	EnsemblPlantsGene:Zm00001d014168
EnsemblPlants:Zm00001d014168_P001	EnsemblPlants:Zm00001d014168_T001	SEG:seg	:	:	:

Description

3-ketoacyl-CoA synthase 2

Coordinates

chr5:+:34952246..34956390

Molecular Weight (calculated)

55110.6 Da

IEP (calculated)

9.362

GRAVY (calculated)

0.068

Length

505 amino acids

Sequence
(BLAST)

001: MVGSREQIGA TTQAPNKVSM SRQVFHVLLL AAVVLLASLL SAKEKLLGLS PAAVAVACWA GAVAAWAYAV SRPRPVYLVD LSGYVGGPSH EASRAKTIAH
101: FGRCGRFSDE SMAFQKRMLE RSGLGEQTHF PASLISVPVD MCLRTAREES HAVIFGVVDE VLRRARVAAA DVGVLIFNSS LLSPTPSFTS LIANRYGMRR
201: DVVSHNLSGM GCSAGIIAID LAKRLLQVHP DTYALVVSTE NITLNAYMGN NRPMLVTNTL FRVGGAAILL SNRGADRRRA KYQLIHTVRT HRGAHDQSFG
301: CVTQEEDDAG CVGVSLSKEL MVVAGEALRT NITTLGPLVL PMSEQLRFLA TVVLNRVFRA NVRAYLPDFR LAFDHFCIHA GGRGVLDELE RSLKLSAWHM
401: EPSRMTLCRF GNTSSSSLWY ELAYCEAKGR IRKGDRVWQI AFGSGFKCNS AVWKALRTVD ASEEGNPWTP EVHVLPIHVP RVSPIDETAY TFPDGATYKV
501: SVSHA

Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)

001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR

Arabidopsis Description

KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.