Factsheet for Os10t0416200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G473900.1	Wheat	mitochondrion	81.07	84.13
TraesCS6A01G415500.2	Wheat	mitochondrion	80.69	83.56
Zm00001d032948_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	75.33	79.6
Zm00001d014168_P001	Maize	peroxisome, plasma membrane, plastid	75.72	78.42
EER91618	Sorghum	plastid	76.48	76.34
Os11t0591200-01	Rice	mitochondrion	51.82	62.73
GSMUA_Achr6P23320_001	Banana	endoplasmic reticulum, golgi, vacuole	43.79	57.39
Os02t0205500-01	Rice	cytosol, peroxisome, plasma membrane	53.35	53.76
Os05t0574600-01	Rice	endoplasmic reticulum, peroxisome, plastid	53.35	53.65
Os06t0598800-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	52.2	52.6
Os05t0568000-02	Rice	plasma membrane	48.95	49.81
Os03t0220100-01	Rice	golgi, mitochondrion	45.89	48.58
Os03t0245700-02	Rice	cytosol, peroxisome, plastid	47.42	46.62
Os06t0262800-01	Rice	plasma membrane	43.21	45.75
Os02t0731900-01	Rice	plasma membrane	43.02	44.91
Os01t0529800-01	Rice	plasma membrane	39.58	43.31
Os03t0181500-01	Rice	plasma membrane	43.4	41.88
Os06t0260500-00	Rice	mitochondrion	39.39	39.09
Os05t0574500-01	Rice	nucleus	6.88	16.29

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	EntrezGene:4348632	MapMan:5.1.6.1.1
ProteinID:AAP53764.1	InterPro:ACP_syn_III_C	ProteinID:BAT10854.1	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
InterPro:IPR016039	EnsemblPlantsGene:Os10g0416200	EnsemblPlants:Os10t0416200-01	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417
PANTHER:PTHR31561	PANTHER:PTHR31561:SF16	UniProt:Q7XEM4	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI00001A3BB3
RefSeq:XP_015614625.1	SEG:seg	:	:	:	:

Description

ONION2Fatty acid elongase (beta-ketoacyl-CoA synthase), Shoot development (Os10t0416200-01)

Coordinates

chr10:-:14560601..14565737

Molecular Weight (calculated)

56870.9 Da

IEP (calculated)

9.634

GRAVY (calculated)

0.048

Length

523 amino acids

Sequence
(BLAST)

001: MDRELVRTVK LATKNHAGVL FRRAVRHLPH IVAVTALVAA APRLSTLLAA AAAGGSTMRW ARALWSDLAG ELGPSAPALA VACWAAALAA YTYAASRPRP
101: VYLIDLAGYK APREHEASRA KTIAHFGRCG RFSGESMAFQ KRMLERSGLG EATHFPTSLI SLPVDMCLRT AREESHAVIF GVVDEVLRKS GVAAADVGVL
201: IFNSSLLSPT PSFTSLIVNR YGMRPGVVSH NLSGMGCSAG IIAIDLAKRL LQVHENTYAL VVSTENITLN AYMGNNRPML VTNTLFRVGG AAILLSNRAA
301: DRRGRAKYQL IHTVRTHRGA HDQSFGCVTQ EEDDAGEVGV SLSKELMVVA GEALKTNITT LGPLVLPISE QLRFLATVVL KRVFRADVKA YLPDFKLALD
401: HFCIHAGGRG VLDELEKSLK LSPWDMEPSR MTLYRFGNTS SSSLWYELAY CEAKGRIKRG DRVWQIAFGS GFKCNSAVWR ALRTVDAAGL DAGDNPWMKE
501: VDMLPVDVPK VAPIDETSYQ IPN

Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)

001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR

Arabidopsis Description

KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.