Factsheet for Os03t0245700-02

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01120.1	Os10t0114400-01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G226100.1	Wheat	peroxisome	89.47	88.31
Zm00001d028406_P001	Maize	peroxisome	90.79	88.3
HORVU4Hr1G063420.1	Barley	peroxisome	90.41	88.26
TraesCS4A01G068400.1	Wheat	peroxisome	89.66	88.17
KXG39781	Sorghum	peroxisome	90.98	88.16
TraesCS4B01G225500.1	Wheat	peroxisome	89.85	87.55
Zm00001d047931_P001	Maize	peroxisome	88.16	85.9
GSMUA_Achr1P02540_001	Banana	cytosol	61.47	77.12
CDY15199	Canola	cytosol	45.49	71.18
Solyc10g009240.2.1	Tomato	peroxisome	62.59	62.95
AT1G01120.1	Thale cress	plasma membrane	62.41	62.88
VIT_15s0048g02720.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.59	62.83
PGSC0003DMT400028047	Potato	plasma membrane	62.22	61.87
Bra032621.1-P	Field mustard	plasma membrane	56.95	61.71
KRH68953	Soybean	cytosol, golgi, nucleus	61.28	61.51
Os11t0591200-01	Rice	mitochondrion	49.25	60.65
CDY37475	Canola	plasma membrane	53.95	60.04
CDY32443	Canola	plasma membrane	53.95	60.04
CDX90012	Canola	cytosol	59.4	59.74
Os06t0598800-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	57.71	59.15
Os05t0574600-01	Rice	endoplasmic reticulum, peroxisome, plastid	57.52	58.85
Os02t0205500-01	Rice	cytosol, peroxisome, plasma membrane	56.39	57.8
Os05t0568000-02	Rice	plasma membrane	54.7	56.61
AT2G46720.1	Thale cress	endoplasmic reticulum, plasma membrane	47.74	54.51
Os03t0220100-01	Rice	golgi, mitochondrion	50.38	54.25
AT3G10280.1	Thale cress	endoplasmic reticulum, plasma membrane	46.62	54.03
Os03t0181500-01	Rice	plasma membrane	50.38	49.45
Os10t0416200-01	Rice	cytosol, mitochondrion	46.62	47.42
Os06t0262800-01	Rice	plasma membrane	42.48	45.75
Os02t0731900-01	Rice	plasma membrane	43.05	45.71
Os01t0529800-01	Rice	plasma membrane	36.65	40.8
CDY41551	Canola	golgi	47.93	40.54
CDX80041	Canola	endoplasmic reticulum, golgi, plasma membrane	47.93	40.03
Os06t0260500-00	Rice	mitochondrion	39.1	39.47
Os05t0574500-01	Rice	nucleus	7.14	17.19

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	EntrezGene:4332236	MapMan:5.1.6.1.1
ProteinID:ABF94942.1	InterPro:ACP_syn_III_C	ProteinID:BAF11454.1	ProteinID:BAS83239.1	ProteinID:EAZ26253.1	InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlantsGene:Os03g0245700	EnsemblPlants:Os03t0245700-02	PFAM:PF08392
PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF67	UniProt:Q10P61	SUPFAM:SSF53901
TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI0000DB4CD4	RefSeq:XP_015627774.1	SEG:seg	:

Description

Thiolase-like, subgroup domain containing protein. (Os03t0245700-02);Similar to senescence-associated protein 15. (Os03t0245700-03)

Coordinates

chr3:-:7686746..7688842

Molecular Weight (calculated)

59319.0 Da

IEP (calculated)

9.102

GRAVY (calculated)

-0.102

Length

532 amino acids

Sequence
(BLAST)

001: MEAAVMERER LTAEMAFRDD ARAAGGEWAP SIVIKIRRRL PDFARSVNLK YVKLGIRHGG SVTSYLPMLC VPLLASAAYS FVRLDVIYRS IDLLTCVAWL
101: GTAVLLLTVY YFKRPRPVYL VEFACYKPDD QHKISKEGFL EMTESTGCFN DAALDFQTKI TNRSALGDET YLPPGVQARP PRLNMAEARM EAEAVMFGCL
201: DALFESTGIN PKRDVGILIV NCSLFNPTPS LSSMIINHYE MRADVKSFNL GGMGCSAGLI AIDLAKDMLQ ANPNSYAVVL STENITLNWY FGNDRSMLLS
301: NCIFRMGGAA ALLSNRRADA GRAKYRLLHT VRTHKGATDE CFNCVYQRED EDGKVGVSLA RELMAVAGDA LKTNITTLGP LVLPLTEQLK FLKSLMMRRV
401: FRVKGVRPYI PDFRRAFEHF CVHAGGRAVL EEVQRSLSLE DRDMEPSKCS LHRFGNTSSS SLWYELAYAE AKGRVQRGNR VWQIGFGSGF KCNSAVWRAL
501: RDVPAVSPPP KGKKSCNPWV DCVAKYPPKA YV

Best Arabidopsis Sequence Match ( AT1G01120.1 )
(BLAST)

001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ

Arabidopsis Description

KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.