Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G46720.1 | Thale cress | endoplasmic reticulum, plasma membrane | 99.13 | 97.64 |
| CDY41551 | Canola | golgi | 88.24 | 64.39 |
| CDX80041 | Canola | endoplasmic reticulum, golgi, plasma membrane | 88.67 | 63.89 |
| AT1G01120.1 | Thale cress | plasma membrane | 59.7 | 51.89 |
| AT2G26640.1 | Thale cress | plasma membrane | 56.86 | 51.28 |
| VIT_15s0048g02720.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 59.04 | 51.13 |
| Solyc10g009240.2.1 | Tomato | peroxisome | 58.61 | 50.85 |
| PGSC0003DMT400028047 | Potato | plasma membrane | 58.39 | 50.09 |
| AT2G15090.1 | Thale cress | golgi | 51.2 | 48.86 |
| AT1G19440.1 | Thale cress | golgi, peroxisome, plasma membrane | 54.68 | 48.64 |
| AT5G43760.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 55.99 | 48.58 |
| AT1G04220.1 | Thale cress | plasma membrane | 55.77 | 48.48 |
| GSMUA_Achr1P02540_001 | Banana | cytosol | 44.44 | 48.11 |
| KRH68953 | Soybean | cytosol, golgi, nucleus | 55.34 | 47.92 |
| AT4G34510.1 | Thale cress | plasma membrane | 50.54 | 47.64 |
| AT2G16280.1 | Thale cress | golgi, peroxisome, plasma membrane | 52.51 | 47.07 |
| AT4G34250.1 | Thale cress | endoplasmic reticulum, golgi | 50.54 | 47.06 |
| AT1G25450.1 | Thale cress | plasma membrane | 50.11 | 46.75 |
| Zm00001d030343_P001 | Maize | cytosol, peroxisome, plasma membrane | 54.47 | 46.73 |
| EER91722 | Sorghum | peroxisome | 54.47 | 46.73 |
| Os03t0245700-02 | Rice | cytosol, peroxisome, plastid | 54.03 | 46.62 |
| TraesCS4D01G226100.1 | Wheat | peroxisome | 54.03 | 46.01 |
| AT1G68530.1 | Thale cress | plasma membrane | 49.67 | 45.88 |
| TraesCS4A01G068400.1 | Wheat | peroxisome | 53.81 | 45.66 |
| TraesCS4B01G225500.1 | Wheat | peroxisome | 54.25 | 45.6 |
| HORVU4Hr1G063420.1 | Barley | peroxisome | 54.03 | 45.5 |
| AT4G34520.1 | Thale cress | golgi | 49.67 | 45.06 |
| Zm00001d028406_P001 | Maize | peroxisome | 52.94 | 44.42 |
| KXG39781 | Sorghum | peroxisome | 52.72 | 44.08 |
| Zm00001d047931_P001 | Maize | peroxisome | 52.07 | 43.77 |
| AT5G49070.1 | Thale cress | plasma membrane, vacuole | 41.18 | 40.73 |
| AT1G71160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 40.52 | 40.43 |
| AT2G26250.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 47.71 | 39.82 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | EntrezGene:820190 |
| ProteinID:AAF02814.1 | InterPro:ACP_syn_III_C | ProteinID:AEE74883.1 | ArrayExpress:AT3G10280 | EnsemblPlantsGene:AT3G10280 | RefSeq:AT3G10280 |
| TAIR:AT3G10280 | RefSeq:AT3G10280-TAIR-G | EnsemblPlants:AT3G10280.1 | TAIR:AT3G10280.1 | Unigene:At.50165 | InterPro:FAE1_typ3_polyketide_synth |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | GO:GO:0102336 | GO:GO:0102337 | GO:GO:0102338 | GO:GO:0102756 |
| InterPro:IPR016039 | Symbol:KCS14 | RefSeq:NP_187639.1 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 |
| PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000293 | PO:PO:0009001 | PO:PO:0009046 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF61 | UniProt:Q9SS39 | SUPFAM:SSF53901 | InterPro:Thiolase-like | UniParc:UPI00000486DF | SEG:seg |
Description
KCS14Probable 3-ketoacyl-CoA synthase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS39]
Coordinates
chr3:+:3180064..3181611
Molecular Weight (calculated)
51628.9 Da
IEP (calculated)
9.348
GRAVY (calculated)
0.031
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MFIAMADFKL LLLILILLSL FELDLLHFHH DFFSPFPVKI GLLLISIFFY AYSTTRSKPV YLVDFSCHQP TDSCKISSET FFNMAKGAQL YTEETIQFMT
101: RILNRSGLGD DTYSPRCMLT SPPTPSMYEA RHESELVIFG ALNSLFKKTG IEPREVGIFI VNCSLFNPNP SLSSMIVNRY KLKTDVKTYN LSGISVDLAT
201: NLLKANPNTY AVIVSTENMT LSMYRGNDRS MLVPNCLFRV GGAAVMLSNR SQDRVRSKYE LTHIVRTHKG SSDKHYTCAE QKEDSKGIVG VALSKELTVV
301: AGDTLKTNLT ALGPLVLPLS EKLRFILFLV KSKLFRLKVS PYVPDFKLCF KHFCIHAGGR ALLDAVEKGL GLSEFDLEPS RMTLHRFGNT SSSSLWYELA
401: YVEAKCRVKR GDRVWQLAFG SGFKCNSIVW RALRTIPANE SLVGNPWGDS VHKYPVHVT
101: RILNRSGLGD DTYSPRCMLT SPPTPSMYEA RHESELVIFG ALNSLFKKTG IEPREVGIFI VNCSLFNPNP SLSSMIVNRY KLKTDVKTYN LSGISVDLAT
201: NLLKANPNTY AVIVSTENMT LSMYRGNDRS MLVPNCLFRV GGAAVMLSNR SQDRVRSKYE LTHIVRTHKG SSDKHYTCAE QKEDSKGIVG VALSKELTVV
301: AGDTLKTNLT ALGPLVLPLS EKLRFILFLV KSKLFRLKVS PYVPDFKLCF KHFCIHAGGR ALLDAVEKGL GLSEFDLEPS RMTLHRFGNT SSSSLWYELA
401: YVEAKCRVKR GDRVWQLAFG SGFKCNSIVW RALRTIPANE SLVGNPWGDS VHKYPVHVT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.