Factsheet for AT1G71160.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 1
plastid 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007966.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	85.65	87.75
CDY66107	Canola	endoplasmic reticulum, plasma membrane, plastid	85.43	87.53
CDY37951	Canola	endoplasmic reticulum, plasma membrane	84.57	86.64
VIT_12s0034g01840.t01	Wine grape	endoplasmic reticulum, golgi	59.35	59.48
KRH10421	Soybean	endoplasmic reticulum, plasma membrane	58.7	58.82
AT5G49070.1	Thale cress	plasma membrane, vacuole	46.3	45.91
AT1G25450.1	Thale cress	plasma membrane	48.48	45.33
AT1G68530.1	Thale cress	plasma membrane	48.48	44.87
AT2G15090.1	Thale cress	golgi	43.7	41.79
AT4G34510.1	Thale cress	plasma membrane	43.91	41.48
AT1G19440.1	Thale cress	golgi, peroxisome, plasma membrane	46.52	41.47
AT2G46720.1	Thale cress	endoplasmic reticulum, plasma membrane	41.74	41.2
AT2G16280.1	Thale cress	golgi, peroxisome, plasma membrane	45.43	40.82
AT4G34250.1	Thale cress	endoplasmic reticulum, golgi	43.7	40.77
AT3G10280.1	Thale cress	endoplasmic reticulum, plasma membrane	40.43	40.52
AT4G34520.1	Thale cress	golgi	43.26	39.33
AT2G26640.1	Thale cress	plasma membrane	43.48	39.29
AT1G04220.1	Thale cress	plasma membrane	45.0	39.2
AT1G01120.1	Thale cress	plasma membrane	44.78	39.02
AT5G43760.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	44.78	38.94
AT2G26250.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	41.3	34.55

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	EntrezGene:843456
UniProt:A0A178W4M1	ProteinID:AAG51695.1	InterPro:ACP_syn_III_C	ProteinID:AEE35167.1	ArrayExpress:AT1G71160	EnsemblPlantsGene:AT1G71160
RefSeq:AT1G71160	TAIR:AT1G71160	RefSeq:AT1G71160-TAIR-G	EnsemblPlants:AT1G71160.1	TAIR:AT1G71160.1	Unigene:At.49516
EMBL:BT015084	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	GO:GO:0102336	GO:GO:0102337
GO:GO:0102338	GO:GO:0102756	InterPro:IPR016039	Symbol:KCS7	RefSeq:NP_177272.1	ProteinID:OAP12062.1
PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PO:PO:0001078	PO:PO:0007611	PO:PO:0007616
PO:PO:0009001	PO:PO:0009010	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0025022
PANTHER:PTHR31561	PANTHER:PTHR31561:SF20	UniProt:Q9C992	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like
UniParc:UPI000004844E	:	:	:	:	:

Description

KCS73-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W4M1]

Coordinates

chr1:-:26828701..26830208

Molecular Weight (calculated)

51499.3 Da

IEP (calculated)

8.258

GRAVY (calculated)

-0.034

Length

460 amino acids

Sequence
(BLAST)

001: MESSFHFINE ALLITQTFIT FHQFLVASAC VLIAVFGYYF FKPRCIIYLI DFSCYQPPDF LRAPVSNFIE HLTISGVFDQ ESLDLQQKIL ERSGISDDAS
101: VPATVHEIPP NASISAAREE THEILFAIVQ DLFSKHEIDP KSIDILVSNC SLFCPSPSIT SMIINKFGMR SDIKSFSLSG MGCSAGILSV NLVKDLMKIH
201: GDSLALVLSM EAVSPNGYRG KCKSMLIANT IFRMGGAAIL LSNRKQDSHK AKYKLQHIIR THVGSDTESY ESVMQQVDEE GKVGVALSKQ LVRVASKALK
301: INVVQLGPRV LPYSEQLKYI ISFIQRKWGM HKEIYTPNFK KAFEHFCIHA GGRAIIEGVE KHLKLDKEDV EASRSTLYRY GNTSSSSLWY ELQYLEAKGR
401: MKMGDKVWQI GFGSGFKANS AVWKCISEID SRGRNAWSDR IHLYPVCGDT SSALKTELLS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.