Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036405.1-P | Field mustard | cytosol, plasma membrane, plastid | 86.49 | 90.24 |
| CDX71202 | Canola | endoplasmic reticulum, golgi, plasma membrane | 89.19 | 89.94 |
| AT4G34250.1 | Thale cress | endoplasmic reticulum, golgi | 75.47 | 73.63 |
| KRH51526 | Soybean | plasma membrane | 57.38 | 62.3 |
| AT4G34520.1 | Thale cress | golgi | 64.66 | 61.46 |
| VIT_03s0063g02640.t01 | Wine grape | plasma membrane | 61.54 | 58.73 |
| AT4G34510.1 | Thale cress | plasma membrane | 59.46 | 58.73 |
| Zm00001d009608_P001 | Maize | plasma membrane | 60.91 | 58.02 |
| Zm00001d039053_P001 | Maize | plasma membrane | 61.95 | 57.98 |
| Os05t0568000-02 | Rice | plasma membrane | 61.75 | 57.78 |
| AT1G19440.1 | Thale cress | golgi, peroxisome, plasma membrane | 61.95 | 57.75 |
| AT2G16280.1 | Thale cress | golgi, peroxisome, plasma membrane | 61.33 | 57.62 |
| EES19964 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 61.54 | 56.92 |
| GSMUA_Achr6P27270_001 | Banana | cytosol, peroxisome, plasma membrane | 49.9 | 56.87 |
| GSMUA_Achr2P08980_001 | Banana | golgi, peroxisome, plasma membrane | 53.64 | 55.84 |
| TraesCS1B01G436300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 60.91 | 55.81 |
| TraesCS1A01G406200.1 | Wheat | plasma membrane | 60.5 | 55.75 |
| TraesCS1D01G414600.1 | Wheat | peroxisome | 60.71 | 55.62 |
| GSMUA_Achr5P09090_001 | Banana | golgi, peroxisome, plasma membrane | 48.44 | 55.61 |
| GSMUA_Achr9P06980_001 | Banana | cytosol, golgi, peroxisome | 53.22 | 54.35 |
| AT2G26640.1 | Thale cress | plasma membrane | 55.3 | 52.26 |
| AT2G46720.1 | Thale cress | endoplasmic reticulum, plasma membrane | 50.31 | 51.93 |
| AT1G25450.1 | Thale cress | plasma membrane | 52.39 | 51.22 |
| AT3G10280.1 | Thale cress | endoplasmic reticulum, plasma membrane | 48.86 | 51.2 |
| AT1G04220.1 | Thale cress | plasma membrane | 55.93 | 50.95 |
| AT1G68530.1 | Thale cress | plasma membrane | 52.6 | 50.91 |
| AT5G43760.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 55.93 | 50.85 |
| HORVU1Hr1G089710.3 | Barley | plastid | 60.91 | 49.75 |
| AT1G01120.1 | Thale cress | plasma membrane | 52.18 | 47.54 |
| AT5G49070.1 | Thale cress | plasma membrane, vacuole | 42.41 | 43.97 |
| AT1G71160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 41.79 | 43.7 |
| AT2G26250.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 47.19 | 41.27 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | EntrezGene:815998 |
| ProteinID:AAD03366.1 | InterPro:ACP_syn_III_C | ProteinID:AEC06369.1 | EMBL:AK229027 | ArrayExpress:AT2G15090 | EnsemblPlantsGene:AT2G15090 |
| RefSeq:AT2G15090 | TAIR:AT2G15090 | RefSeq:AT2G15090-TAIR-G | EnsemblPlants:AT2G15090.1 | TAIR:AT2G15090.1 | EMBL:BT023427 |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | GO:GO:0102336 | GO:GO:0102337 | GO:GO:0102338 | GO:GO:0102756 |
| InterPro:IPR016039 | Symbol:KCS8 | RefSeq:NP_179113.2 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 |
| PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PANTHER:PTHR31561 | PANTHER:PTHR31561:SF23 | UniProt:Q4V3C9 | SUPFAM:SSF53901 | SignalP:SignalP-TM |
| TMHMM:TMhelix | InterPro:Thiolase-like | UniParc:UPI0000196B12 | SEG:seg | : | : |
Description
KCS83-ketoacyl-CoA synthase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3C9]
Coordinates
chr2:+:6542166..6544118
Molecular Weight (calculated)
54194.2 Da
IEP (calculated)
9.361
GRAVY (calculated)
-0.087
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNLKMVFFK ILFISLMAGL AMKGSKINVE DLQKFSLHHT QNNLQTISLL LFLVVFVWIL YMLTRPKPVY LVDFSCYLPP SHLKVSIQTL MGHARRAREA
101: GMCWKNKESD HLVDFQEKIL ERSGLGQETY IPEGLQCFPL QQGMGASRKE TEEVIFGALD NLFRNTGVKP DDIGILVVNS STFNPTPSLA SMIVNKYKLR
201: DNIKSLNLGG MGCSAGVIAV DVAKGLLQVH RNTYAIVVST ENITQNLYLG KNKSMLVTNC LFRVGGAAVL LSNRSRDRNR AKYELVHTVR IHTGSDDRSF
301: ECATQEEDED GIIGVTLTKN LPMVAARTLK INIATLGPLV LPLKEKLAFF ITFVKKKYFK PELRNYTPDF KLAFEHFCIH AGGRALIDEL EKNLKLSPLH
401: VEASRMTLHR FGNTSSSSIW YELAYTEAKG RMKEGDRIWQ IALGSGFKCN SSVWVALRDV KPSANSPWED CMDRYPVEID I
101: GMCWKNKESD HLVDFQEKIL ERSGLGQETY IPEGLQCFPL QQGMGASRKE TEEVIFGALD NLFRNTGVKP DDIGILVVNS STFNPTPSLA SMIVNKYKLR
201: DNIKSLNLGG MGCSAGVIAV DVAKGLLQVH RNTYAIVVST ENITQNLYLG KNKSMLVTNC LFRVGGAAVL LSNRSRDRNR AKYELVHTVR IHTGSDDRSF
301: ECATQEEDED GIIGVTLTKN LPMVAARTLK INIATLGPLV LPLKEKLAFF ITFVKKKYFK PELRNYTPDF KLAFEHFCIH AGGRALIDEL EKNLKLSPLH
401: VEASRMTLHR FGNTSSSSIW YELAYTEAKG RMKEGDRIWQ IALGSGFKCN SSVWVALRDV KPSANSPWED CMDRYPVEID I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.