Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70186 | Canola | plastid | 91.94 | 91.23 |
| CDX98800 | Canola | plastid | 92.34 | 90.73 |
| Bra009413.1-P | Field mustard | cytosol, golgi, plasma membrane | 91.94 | 90.52 |
| VIT_04s0008g04710.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 81.53 | 81.21 |
| Solyc08g067410.1.1 | Tomato | plasma membrane | 79.96 | 80.59 |
| PGSC0003DMT400019029 | Potato | plasma membrane | 79.96 | 80.59 |
| Solyc06g065560.1.1 | Tomato | nucleus | 80.35 | 79.73 |
| PGSC0003DMT400067205 | Potato | peroxisome | 80.16 | 79.53 |
| GSMUA_Achr10P... | Banana | plasma membrane | 66.21 | 78.01 |
| Zm00001d046444_P001 | Maize | plasma membrane | 78.59 | 77.67 |
| GSMUA_Achr7P08410_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 59.53 | 77.49 |
| GSMUA_AchrUn_... | Banana | peroxisome | 60.31 | 77.33 |
| EER88601 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 78.39 | 77.33 |
| TraesCS7B01G254900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 78.59 | 76.78 |
| Solyc12g006820.1.1 | Tomato | plasma membrane | 75.25 | 76.6 |
| Os06t0598800-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 78.0 | 76.49 |
| Os05t0574600-01 | Rice | endoplasmic reticulum, peroxisome, plastid | 78.0 | 76.35 |
| TraesCS7D01G350500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 78.0 | 76.2 |
| PGSC0003DMT400002734 | Potato | cytosol, peroxisome, plasma membrane | 75.83 | 75.54 |
| Zm00001d016438_P001 | Maize | endoplasmic reticulum, peroxisome, plasma membrane | 75.64 | 74.47 |
| TraesCS6D01G166600.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 76.62 | 74.43 |
| TraesCS6B01G207000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 76.42 | 74.24 |
| TraesCS7A01G372300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 76.62 | 74.14 |
| EES19987 | Sorghum | cytosol, endoplasmic reticulum, plastid | 74.46 | 73.88 |
| EES06493 | Sorghum | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 75.44 | 73.28 |
| Zm00001d039094_P001 | Maize | cytosol | 71.51 | 71.51 |
| Os02t0205500-01 | Rice | cytosol, peroxisome, plasma membrane | 72.89 | 71.48 |
| HORVU1Hr1G090730.1 | Barley | peroxisome, plasma membrane, plastid | 72.1 | 70.85 |
| TraesCS1A01G413400.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 71.71 | 70.19 |
| TraesCS1D01G420900.1 | Wheat | peroxisome | 71.51 | 70.13 |
| AT1G04220.1 | Thale cress | plasma membrane | 70.73 | 68.18 |
| TraesCS6A01G177700.1 | Wheat | plastid | 76.62 | 68.06 |
| AT5G43760.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 70.73 | 68.05 |
| HORVU6Hr1G036950.5 | Barley | cytosol, peroxisome | 76.82 | 67.76 |
| HORVU7Hr1G084610.6 | Barley | cytosol, mitochondrion, plastid | 78.78 | 66.83 |
| AT1G19440.1 | Thale cress | golgi, peroxisome, plasma membrane | 65.23 | 64.34 |
| AT2G16280.1 | Thale cress | golgi, peroxisome, plasma membrane | 63.46 | 63.09 |
| AT4G34510.1 | Thale cress | plasma membrane | 57.96 | 60.57 |
| AT1G01120.1 | Thale cress | plasma membrane | 60.31 | 58.14 |
| AT1G68530.1 | Thale cress | plasma membrane | 55.6 | 56.94 |
| AT3G10280.1 | Thale cress | endoplasmic reticulum, plasma membrane | 51.28 | 56.86 |
| AT1G25450.1 | Thale cress | plasma membrane | 54.81 | 56.71 |
| AT2G46720.1 | Thale cress | endoplasmic reticulum, plasma membrane | 51.87 | 56.65 |
| AT2G15090.1 | Thale cress | golgi | 52.26 | 55.3 |
| AT4G34520.1 | Thale cress | golgi | 54.42 | 54.74 |
| AT4G34250.1 | Thale cress | endoplasmic reticulum, golgi | 52.46 | 54.16 |
| AT2G26250.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 55.6 | 51.45 |
| AT5G49070.1 | Thale cress | plasma membrane, vacuole | 39.88 | 43.75 |
| AT1G71160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 39.29 | 43.48 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | EntrezGene:817205 |
| UniProt:A0A178VRM0 | ProteinID:AAB95298.1 | InterPro:ACP_syn_III_C | ProteinID:AEC07869.1 | ArrayExpress:AT2G26640 | EnsemblPlantsGene:AT2G26640 |
| RefSeq:AT2G26640 | TAIR:AT2G26640 | RefSeq:AT2G26640-TAIR-G | EnsemblPlants:AT2G26640.1 | TAIR:AT2G26640.1 | Unigene:At.48521 |
| EMBL:BT003854 | EMBL:BT005692 | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0006629 | GO:GO:0006633 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009409 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | GO:GO:0102336 | GO:GO:0102337 | GO:GO:0102338 |
| GO:GO:0102756 | InterPro:IPR016039 | Symbol:KCS11 | RefSeq:NP_180232.1 | UniProt:O48780 | ProteinID:OAP07492.1 |
| PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31561 | PANTHER:PTHR31561:SF19 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | UniParc:UPI000000C1A3 |
Description
KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
Coordinates
chr2:+:11329719..11331858
Molecular Weight (calculated)
57817.8 Da
IEP (calculated)
9.551
GRAVY (calculated)
-0.101
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.