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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • nucleus 1
  • plasma membrane 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:nucleus, plasma membrane, plastid, vacuole
BaCelLo:plastid
ChloroP:plastid
MultiLoc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G206200.2
TraesCS4B01G109800.2
TraesCS4D01G107200.1
TraesCS5A01G107900.1
TraesCS5B01G115400.1
TraesCS5D01G122800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G26640.1 TraesCS4A01G206200.2 AT4G09570.1 19130088
AT2G26640.1 TraesCS4B01G109800.2 AT4G09570.1 19130088
AT2G26640.1 TraesCS4D01G107200.1 AT4G09570.1 19130088
AT2G26640.1 TraesCS5A01G107900.1 AT4G09570.1 19130088
AT2G26640.1 TraesCS5B01G115400.1 AT4G09570.1 19130088
AT2G26640.1 TraesCS5D01G122800.1 AT4G09570.1 19130088
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G207000.1 Wheat endoplasmic reticulum, plasma membrane, plastid 90.4 98.86
TraesCS6D01G166600.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 90.4 98.86
HORVU6Hr1G036950.5 Barley cytosol, peroxisome 92.15 91.51
Zm00001d016438_P001 Maize endoplasmic reticulum, peroxisome, plasma membrane 75.39 83.56
EES06493 Sorghum endoplasmic reticulum, peroxisome, plasma membrane, plastid 74.69 81.68
TraesCS7A01G372300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 73.65 80.23
Os02t0205500-01 Rice cytosol, peroxisome, plasma membrane 71.55 79.0
KRH56654 Soybean endoplasmic reticulum 69.98 78.63
GSMUA_AchrUn_... Banana peroxisome 54.28 78.34
KRH03757 Soybean cytosol, peroxisome, plasma membrane 69.63 78.24
GSMUA_Achr10P... Banana plasma membrane 58.81 78.01
VIT_04s0008g04710.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 69.28 77.69
Solyc06g065560.1.1 Tomato nucleus 69.46 77.58
PGSC0003DMT400067205 Potato peroxisome 69.46 77.58
Solyc08g067410.1.1 Tomato plasma membrane 68.24 77.43
CDX70186 Canola plastid 69.28 77.39
Bra009413.1-P Field mustard cytosol, golgi, plasma membrane 69.81 77.37
PGSC0003DMT400019029 Potato plasma membrane 67.89 77.03
CDX98800 Canola plastid 69.63 77.03
GSMUA_Achr7P08410_001 Banana endoplasmic reticulum, peroxisome, plasma membrane 52.36 76.73
AT2G26640.1 Thale cress plasma membrane 68.06 76.62
KRH63016 Soybean cytosol, peroxisome, plasma membrane 68.06 76.47
KRH54862 Soybean cytosol, peroxisome, plasma membrane 67.02 75.29
Solyc12g006820.1.1 Tomato plasma membrane 65.27 74.8
PGSC0003DMT400002734 Potato cytosol, peroxisome, plasma membrane 65.62 73.58
TraesCS1A01G413400.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 63.87 70.38
VIT_11s0016g04700.t01 Wine grape plastid 71.73 66.61
TraesCS6A01G073300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 58.64 66.14
TraesCS1A01G406200.1 Wheat plasma membrane 59.51 65.33
TraesCS4A01G164400.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 58.29 65.23
TraesCS4A01G065300.1 Wheat mitochondrion, plasma membrane 54.28 62.7
TraesCS7A01G032900.1 Wheat cytosol 32.64 54.05
TraesCS4A01G025300.1 Wheat golgi 47.82 53.83
TraesCS6A01G415500.2 Wheat mitochondrion 47.29 53.66
TraesCS4A01G068400.1 Wheat peroxisome 50.26 53.23
TraesCS1A01G369100.1 Wheat golgi 46.6 52.98
TraesCS1A01G392800.1 Wheat plasma membrane 42.41 52.26
TraesCS4A01G007400.1 Wheat cytosol, peroxisome, plasma membrane 47.99 50.93
TraesCS6A01G293700.1 Wheat golgi, plasma membrane 42.06 49.79
TraesCS7A01G205700.1 Wheat golgi 42.23 49.29
TraesCS4A01G303900.1 Wheat plasma membrane 41.54 48.37
TraesCS4A01G031500.1 Wheat plasma membrane 40.14 47.62
TraesCS7A01G532300.1 Wheat golgi 39.79 47.6
TraesCS7A01G108300.1 Wheat plasma membrane 36.3 46.43
TraesCS3A01G451100.1 Wheat plasma membrane 39.62 46.42
TraesCS7A01G205800.1 Wheat endoplasmic reticulum, golgi, vacuole 36.13 46.0
TraesCS6A01G341400.1 Wheat golgi 40.31 45.92
TraesCS4A01G456600.1 Wheat plasma membrane 35.95 45.47
TraesCS1A01G040900.1 Wheat golgi 37.87 45.4
TraesCS7A01G532200.1 Wheat cytosol 8.2 45.19
TraesCS1A01G037600.1 Wheat endoplasmic reticulum, golgi, plasma membrane 38.22 44.88
TraesCS7A01G206000.1 Wheat golgi 38.57 44.83
TraesCS6A01G025200.1 Wheat plasma membrane 38.05 44.76
TraesCS6A01G024400.1 Wheat plasma membrane 37.87 44.38
TraesCS2A01G014600.1 Wheat plasma membrane 38.05 43.95
TraesCS5A01G076500.1 Wheat golgi 37.17 43.38
TraesCS2A01G507700.1 Wheat golgi, plasma membrane 34.55 43.23
TraesCS3A01G279400.1 Wheat plasma membrane 36.47 42.74
TraesCS7A01G108000.1 Wheat golgi, plasma membrane, plastid 34.55 41.25
TraesCS7A01G107700.1 Wheat mitochondrion, plastid 35.6 41.05
TraesCS7A01G107900.1 Wheat golgi, mitochondrion 33.51 40.25
TraesCS1A01G439000.1 Wheat plasma membrane 34.21 39.2
TraesCS1A01G413000.1 Wheat golgi 6.98 18.1
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740
GO:GO:0016747InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF8SUPFAM:SSF53901SignalP:SignalP-noTMTMHMM:TMhelixInterPro:Thiolase-likeEnsemblPlantsGene:TraesCS6A01G177700
EnsemblPlants:TraesCS6A01G177700.1TIGR:cd00831SEG:seg:::
Description
No Description!
Coordinates
chr6A:-:199014115..199016141
Molecular Weight (calculated)
64434.6 Da
IEP (calculated)
9.841
GRAVY (calculated)
-0.162
Length
573 amino acids
Sequence
(BLAST)
001: MPASVSLLLL LPPPCCSRRQ GQERDECGAR RRRRRRRRTR RRLRPFERGT MSMEDSAQPA GAASAGERAS SPSPSRRLPD FLQSVRLKYV KLGYHYLITH
101: GMYLLLTPLI VLIAVHLSTL SPGDVADLWT HLRFNLLSVI ACSTLLVFLS TVYFLTRPRS VYLVDFGCYK PGPERRCSRE TFMRCSKLTG NFTEANLDFQ
201: RKILERSGLG EDTYIPPALV TVPPNPSMEL ARQEAQVCMF GAIDNMLAKT GVKPKDIGIL VVNCSLFNPT PSLSAMVVNH YKLRGNIVSY NLGGMGCSAG
301: LLSIDLAKDL LQVHPNSYAM VVSTENITLN WYFGNNRSML VSNCLFRMGC AAILLSNKRS DRRRSKYELV HTVRTHKGAD DKCFSCVTQE EDDSGKVGVA
401: LSKDLMAVAG DALKTNITTL GPLVLPFSEQ LLFMVTLVGK KLFKMKIKPY IPDFKLAFEH FCIHAGGRAV LDEIEKNMDL TDWHMEPSRM TLFRFGNTSS
501: SSLWYELAYS EAKGRIRRRD RIWQIAFGSG FKCNSAVWKA LRSVNPAKEQ NNPWMDEIDT FPVDVPKVSK VAE
Best Arabidopsis Sequence Match ( AT2G26640.1 )
(BLAST)
001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI
Arabidopsis Description
KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.