Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G242200.1 | Wheat | mitochondrion, plasma membrane | 98.59 | 98.59 |
| HORVU4Hr1G067340.2 | Barley | golgi | 97.18 | 96.21 |
| Zm00001d028241_P003 | Maize | endoplasmic reticulum, golgi, plasma membrane | 89.92 | 90.28 |
| EER92628 | Sorghum | plasma membrane | 89.72 | 90.08 |
| Os03t0220100-01 | Rice | golgi, mitochondrion | 89.31 | 89.68 |
| Zm00001d048061_P001 | Maize | golgi | 86.09 | 86.44 |
| GSMUA_Achr2P21590_001 | Banana | golgi, peroxisome, plastid | 63.71 | 81.87 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi, plasma membrane | 72.58 | 81.26 |
| GSMUA_Achr3P02180_001 | Banana | plasma membrane | 57.26 | 80.45 |
| KRH35956 | Soybean | plasma membrane | 78.02 | 78.02 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 77.22 | 77.85 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 77.42 | 77.42 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 75.81 | 75.81 |
| Bra004034.1-P | Field mustard | plasma membrane | 75.0 | 75.61 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 75.4 | 75.4 |
| AT1G68530.1 | Thale cress | plasma membrane | 75.4 | 75.25 |
| CDY04232 | Canola | plasma membrane | 75.4 | 75.25 |
| CDY07381 | Canola | plasma membrane | 75.2 | 75.05 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 75.0 | 75.0 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 75.0 | 75.0 |
| AT1G25450.1 | Thale cress | plasma membrane | 74.19 | 74.8 |
| GSMUA_Achr8P30930_001 | Banana | endoplasmic reticulum, extracellular | 58.06 | 74.61 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 74.4 | 74.4 |
| Solyc02g063140.2.1 | Tomato | golgi | 73.99 | 73.99 |
| Bra024749.1-P | Field mustard | plasma membrane | 73.59 | 73.44 |
| CDY42109 | Canola | plasma membrane | 73.59 | 73.44 |
| PGSC0003DMT400037757 | Potato | plastid | 65.93 | 70.93 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 68.75 | 69.03 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 67.94 | 68.22 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 67.14 | 67.68 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 68.75 | 65.7 |
| TraesCS1A01G392800.1 | Wheat | plasma membrane | 57.86 | 61.72 |
| TraesCS7A01G205700.1 | Wheat | golgi | 60.69 | 61.3 |
| TraesCS6A01G293700.1 | Wheat | golgi, plasma membrane | 59.27 | 60.74 |
| TraesCS1A01G406200.1 | Wheat | plasma membrane | 63.91 | 60.73 |
| TraesCS4A01G031500.1 | Wheat | plasma membrane | 56.85 | 58.39 |
| TraesCS7A01G032900.1 | Wheat | cytosol | 40.73 | 58.38 |
| TraesCS7A01G372300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 61.9 | 58.37 |
| TraesCS7A01G532300.1 | Wheat | golgi | 56.25 | 58.25 |
| TraesCS4A01G303900.1 | Wheat | plasma membrane | 57.66 | 58.13 |
| TraesCS1A01G413400.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 60.28 | 57.5 |
| TraesCS6A01G073300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 56.85 | 55.51 |
| TraesCS4A01G164400.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 57.06 | 55.27 |
| TraesCS4A01G456600.1 | Wheat | plasma membrane | 49.6 | 54.3 |
| TraesCS6A01G177700.1 | Wheat | plastid | 62.7 | 54.28 |
| TraesCS7A01G206000.1 | Wheat | golgi | 53.63 | 53.96 |
| TraesCS6A01G341400.1 | Wheat | golgi | 54.64 | 53.88 |
| TraesCS1A01G040900.1 | Wheat | golgi | 51.21 | 53.14 |
| TraesCS1A01G037600.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 51.81 | 52.66 |
| TraesCS7A01G108300.1 | Wheat | plasma membrane | 47.18 | 52.23 |
| TraesCS3A01G451100.1 | Wheat | plasma membrane | 51.41 | 52.15 |
| TraesCS3A01G279400.1 | Wheat | plasma membrane | 51.41 | 52.15 |
| TraesCS7A01G205800.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 46.98 | 51.78 |
| TraesCS6A01G025200.1 | Wheat | plasma membrane | 50.2 | 51.13 |
| TraesCS7A01G532200.1 | Wheat | cytosol | 10.69 | 50.96 |
| TraesCS2A01G014600.1 | Wheat | plasma membrane | 49.8 | 49.8 |
| TraesCS4A01G025300.1 | Wheat | golgi | 51.01 | 49.71 |
| TraesCS4A01G068400.1 | Wheat | peroxisome | 53.63 | 49.17 |
| TraesCS5A01G076500.1 | Wheat | golgi | 48.39 | 48.88 |
| TraesCS6A01G024400.1 | Wheat | plasma membrane | 48.19 | 48.88 |
| TraesCS1A01G369100.1 | Wheat | golgi | 49.6 | 48.81 |
| TraesCS4A01G007400.1 | Wheat | cytosol, peroxisome, plasma membrane | 52.82 | 48.52 |
| TraesCS6A01G415500.2 | Wheat | mitochondrion | 49.19 | 48.32 |
| TraesCS1A01G439000.1 | Wheat | plasma membrane | 48.59 | 48.2 |
| TraesCS2A01G507700.1 | Wheat | golgi, plasma membrane | 43.75 | 47.38 |
| TraesCS7A01G108000.1 | Wheat | golgi, plasma membrane, plastid | 45.56 | 47.08 |
| TraesCS7A01G107700.1 | Wheat | mitochondrion, plastid | 45.56 | 45.47 |
| TraesCS7A01G107900.1 | Wheat | golgi, mitochondrion | 42.94 | 44.65 |
| TraesCS1A01G413000.1 | Wheat | golgi | 7.46 | 16.74 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF5 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS4A01G065300 | EnsemblPlants:TraesCS4A01G065300.1 |
| TIGR:cd00831 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:62537927..62539496
Molecular Weight (calculated)
55938.5 Da
IEP (calculated)
9.660
GRAVY (calculated)
0.005
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSALGSGFA GSVRLKYVKL GYQYLVNHFL ALLLVPVMAA TAIELARLGP GELLALWRAL HLDLVHILCS AFLVVFVATV YFMSRPRPVF LVDYCCYKPS
101: PSFRVPFTTF MEHIKLISNN DRSLRFQTRI LERSGLGEET CLPPANHYIP PNPSMEASRA EAQLVIFNAI DDLVRRTGLK PKDIDILVVN CSLFSPTPSL
201: SAMIINKYKL RSNIRSFNLS GMGCSAGLIS IDLARDMLQV HPNSNALVIS TEIITPNFYH GSRRDMLLPN CLFRMGAAAI LLSNRRREAR RAKYRLVHVV
301: RTHKGADDRA YRCVYEEEDD EGHSGISLSK ELMAIAGEAL KSNITTMGPL VLPMSEQLLF FFRLVGRKVV NSKWKPYIPD FKLAFEHFCI HAGGRAVIDE
401: LQKNLELSPR HVEASRMTLH RFGNTSSSSL WYELAYIEAK GRMRKGDRVW QIGFGSGFKC NSAVWKCLRT VKTPTDGPWE DCIQRYPVHI PDVVKL
101: PSFRVPFTTF MEHIKLISNN DRSLRFQTRI LERSGLGEET CLPPANHYIP PNPSMEASRA EAQLVIFNAI DDLVRRTGLK PKDIDILVVN CSLFSPTPSL
201: SAMIINKYKL RSNIRSFNLS GMGCSAGLIS IDLARDMLQV HPNSNALVIS TEIITPNFYH GSRRDMLLPN CLFRMGAAAI LLSNRRREAR RAKYRLVHVV
301: RTHKGADDRA YRCVYEEEDD EGHSGISLSK ELMAIAGEAL KSNITTMGPL VLPMSEQLLF FFRLVGRKVV NSKWKPYIPD FKLAFEHFCI HAGGRAVIDE
401: LQKNLELSPR HVEASRMTLH RFGNTSSSSL WYELAYIEAK GRMRKGDRVW QIGFGSGFKC NSAVWKCLRT VKTPTDGPWE DCIQRYPVHI PDVVKL
001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL
Arabidopsis Description
CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.