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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 3
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400062136 Potato cytosol, golgi, plasma membrane 94.15 94.15
Solyc02g085870.2.1 Tomato plasma membrane 88.1 88.1
VIT_14s0006g02990.t01 Wine grape plasma membrane 85.48 86.18
KRH35956 Soybean plasma membrane 84.48 84.48
KRG90814 Soybean cytosol, golgi, plasma membrane 83.87 83.87
Bra004034.1-P Field mustard plasma membrane 82.46 83.13
AT1G25450.1 Thale cress plasma membrane 82.06 82.72
AT1G68530.1 Thale cress plasma membrane 82.86 82.7
KRH45255 Soybean endoplasmic reticulum, peroxisome, plasma membrane 82.66 82.66
CDY07381 Canola plasma membrane 82.66 82.5
CDY04232 Canola plasma membrane 82.06 81.89
Bra024749.1-P Field mustard plasma membrane 80.24 80.08
CDY42109 Canola plasma membrane 80.04 79.88
GSMUA_Achr2P21590_001 Banana golgi, peroxisome, plastid 60.08 77.2
GSMUA_Achr3P02180_001 Banana plasma membrane 53.83 75.64
Os03t0220100-01 Rice golgi, mitochondrion 75.2 75.51
EER92628 Sorghum plasma membrane 74.8 75.1
Zm00001d028241_P003 Maize endoplasmic reticulum, golgi, plasma membrane 74.19 74.49
TraesCS4D01G242200.1 Wheat mitochondrion, plasma membrane 74.19 74.19
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi, plasma membrane 66.13 74.04
TraesCS4A01G065300.1 Wheat mitochondrion, plasma membrane 73.99 73.99
VIT_19s0093g00440.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 73.39 73.98
HORVU4Hr1G067340.2 Barley golgi 74.6 73.85
Solyc05g009270.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 72.98 73.28
Zm00001d048061_P001 Maize golgi 71.77 72.06
GSMUA_Achr3P07400_001 Banana plasma membrane 56.25 71.72
Solyc05g009280.2.1 Tomato golgi, plasma membrane, plastid 73.59 70.33
GSMUA_Achr8P30930_001 Banana endoplasmic reticulum, extracellular 54.64 70.21
Zm00001d045660_P001 Maize mitochondrion 41.13 70.1
Zm00001d037328_P001 Maize cytosol 48.99 66.21
GSMUA_Achr5P05870_001 Banana plasma membrane 52.82 62.38
Solyc08g067410.1.1 Tomato plasma membrane 60.48 59.41
Solyc12g006820.1.1 Tomato plasma membrane 59.88 59.4
Solyc06g065560.1.1 Tomato nucleus 61.29 59.26
KXG30818 Sorghum golgi, mitochondrion 58.06 59.14
Solyc09g083050.2.1 Tomato plasma membrane 61.09 59.06
Zm00001d051787_P001 Maize mitochondrion 57.66 58.97
HORVU0Hr1G038430.1 Barley endoplasmic reticulum, plasma membrane 54.64 58.91
Solyc04g080450.1.1 Tomato golgi, peroxisome, plasma membrane 61.29 58.8
TraesCS4D01G008100.1 Wheat plasma membrane 50.6 58.64
TraesCS1B01G421100.1 Wheat golgi 54.64 58.41
TraesCS7A01G205700.1 Wheat golgi 57.46 58.04
TraesCS7B01G113000.1 Wheat golgi 57.26 57.84
TraesCS1D01G401000.1 Wheat plasma membrane 54.03 57.76
TraesCS7D01G208500.1 Wheat golgi 57.46 57.69
TraesCS1A01G392800.1 Wheat plasma membrane 54.03 57.63
Zm00001d017941_P001 Maize plasma membrane 57.26 57.61
EER89559 Sorghum mitochondrion, plasma membrane 56.85 57.55
TraesCS4B01G274700.1 Wheat plastid 55.44 57.41
KXG19727 Sorghum mitochondrion, plastid 56.85 57.2
Os02t0731900-01 Rice plasma membrane 57.66 57.09
TraesCS7D01G208600.1 Wheat cytosol 43.95 57.07
TraesCS7A01G032900.1 Wheat cytosol 39.72 56.94
TraesCS4A01G031500.1 Wheat plasma membrane 55.44 56.94
TraesCS6D01G274600.1 Wheat golgi, plasma membrane 55.44 56.82
TraesCS4D01G273400.1 Wheat endoplasmic reticulum 55.24 56.73
Os06t0262800-01 Rice plasma membrane 56.45 56.68
TraesCS6A01G293700.1 Wheat golgi, plasma membrane 55.24 56.61
Solyc03g005320.2.1 Tomato plasma membrane 59.07 56.45
HORVU6Hr1G073300.1 Barley golgi, plasma membrane 55.04 56.41
TraesCS6B01G324200.1 Wheat plasma membrane 55.04 56.41
TraesCS7D01G035700.1 Wheat plasma membrane 54.64 55.88
TraesCS7D01G519300.1 Wheat golgi, plasma membrane 53.63 55.65
TraesCS4A01G303900.1 Wheat plasma membrane 55.04 55.49
HORVU7Hr1G006910.1 Barley plasma membrane 54.44 55.44
TraesCS7D01G519400.1 Wheat plasma membrane 53.43 55.32
TraesCSU01G166100.1 Wheat plasma membrane 54.84 55.28
TraesCS7A01G532300.1 Wheat golgi 53.02 54.91
Solyc06g053870.2.1 Tomato mitochondrion 53.43 54.53
TraesCS7B01G449300.1 Wheat plasma membrane 52.22 54.18
Solyc05g013220.2.1 Tomato endoplasmic reticulum, golgi, plastid 53.63 53.96
TraesCS7B01G449000.1 Wheat golgi 52.82 53.8
HORVU1Hr1G086760.1 Barley cytosol 54.23 53.27
TraesCS7D01G209400.1 Wheat cytosol 39.72 52.67
KXG19733 Sorghum endoplasmic reticulum, plasma membrane, vacuole 50.4 51.98
TraesCS1A01G037600.1 Wheat endoplasmic reticulum, golgi, plasma membrane 50.6 51.43
TraesCS7D01G029500.1 Wheat plasma membrane 47.38 51.42
EER89567 Sorghum endoplasmic reticulum, golgi, plastid 47.18 51.32
TraesCS6A01G341400.1 Wheat golgi 52.02 51.29
TraesCS2D01G508000.1 Wheat mitochondrion 32.86 51.26
TraesCS3A01G279400.1 Wheat plasma membrane 50.4 51.12
TraesCS7D01G208800.1 Wheat endoplasmic reticulum 49.8 50.93
Solyc06g053900.2.1 Tomato cytosol, plasma membrane, plastid 50.81 50.91
TraesCS6B01G372900.1 Wheat golgi 51.61 50.89
TraesCS6D01G321600.1 Wheat golgi 51.61 50.89
Os01t0529800-01 Rice plasma membrane 48.99 50.84
TraesCS1D01G042300.1 Wheat golgi 48.99 50.84
TraesCS3B01G488500.1 Wheat plasma membrane 50.2 50.82
TraesCS3D01G279300.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.8 50.72
TraesCS7D01G102300.1 Wheat mitochondrion 29.64 50.69
TraesCS7A01G108300.1 Wheat plasma membrane 45.77 50.67
Solyc10g009240.2.1 Tomato peroxisome 54.03 50.66
TraesCS1A01G040900.1 Wheat golgi 48.79 50.63
TraesCS1D01G039200.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.6 50.62
HORVU7Hr1G042040.1 Barley golgi 50.6 50.6
TraesCS7A01G206000.1 Wheat golgi 50.2 50.51
TraesCS1B01G048000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.6 50.41
TraesCS4A01G456600.1 Wheat plasma membrane 45.97 50.33
TraesCS3D01G444000.1 Wheat golgi 49.6 50.31
TraesCS7B01G113100.1 Wheat endoplasmic reticulum, golgi, plasma membrane 45.56 50.22
HORVU6Hr1G094160.2 Barley endoplasmic reticulum, golgi, plasma membrane 49.6 50.2
TraesCS7D01G089200.1 Wheat endoplasmic reticulum, plasma membrane 47.78 50.11
HORVU3Hr1G097570.1 Barley golgi 49.4 50.1
TraesCS7A01G205800.1 Wheat endoplasmic reticulum, golgi, vacuole 45.36 50.0
TraesCS7B01G113200.1 Wheat golgi 50.0 49.9
TraesCS3A01G451100.1 Wheat plasma membrane 49.19 49.9
Zm00001d044580_P001 Maize mitochondrion 48.99 49.9
TraesCS6B01G373000.1 Wheat endoplasmic reticulum, golgi 41.94 49.88
HORVU7Hr1G023540.1 Barley mitochondrion 28.63 49.82
EES03073 Sorghum endoplasmic reticulum, golgi, plasma membrane 49.19 49.8
Zm00001d009354_P001 Maize endoplasmic reticulum 48.79 49.79
TraesCS1B01G053700.1 Wheat endoplasmic reticulum 49.8 49.7
HORVU7Hr1G042050.1 Barley golgi 48.79 49.69
EES00849 Sorghum endoplasmic reticulum, golgi 49.19 49.39
TraesCS6B01G036000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 48.59 49.39
HORVU6Hr1G082270.1 Barley golgi 50.81 49.22
EER88189 Sorghum endoplasmic reticulum, plasma membrane, vacuole 47.78 49.17
OQU76197 Sorghum golgi 47.38 49.06
TraesCS3B01G313800.1 Wheat endoplasmic reticulum, golgi, plasma membrane 50.0 49.01
HORVU6Hr1G004830.1 Barley golgi 48.99 48.99
HORVU7Hr1G023280.1 Barley plasma membrane 44.56 48.89
Os06t0260500-00 Rice mitochondrion 51.81 48.77
TraesCS7D01G208700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 45.36 48.7
TraesCS7A01G532200.1 Wheat cytosol 10.08 48.08
TraesCS2A01G014600.1 Wheat plasma membrane 47.78 47.78
Zm00001d044579_P001 Maize golgi 47.58 47.77
TraesCS6A01G025200.1 Wheat plasma membrane 46.77 47.64
TraesCS7D01G102900.1 Wheat golgi, plasma membrane, plastid 45.36 46.88
TraesCS6A01G024400.1 Wheat plasma membrane 46.17 46.83
Solyc08g067260.2.1 Tomato cytosol, peroxisome, plasma membrane 47.18 46.25
TraesCS5D01G089800.1 Wheat golgi 45.56 46.22
TraesCS2D01G508200.1 Wheat plasma membrane, plastid 42.34 45.85
TraesCS5A01G076500.1 Wheat golgi 45.36 45.82
TraesCS7A01G108000.1 Wheat golgi, plasma membrane, plastid 44.15 45.62
TraesCS7B01G006100.1 Wheat mitochondrion 44.76 45.59
TraesCS4D01G008200.1 Wheat plasma membrane 45.16 45.53
HORVU5Hr1G087530.1 Barley plasma membrane 44.56 45.47
TraesCS2A01G507700.1 Wheat golgi, plasma membrane 41.94 45.41
HORVU3Hr1G069880.2 Barley mitochondrion, plastid 48.99 45.34
TraesCS2B01G535600.1 Wheat golgi, mitochondrion 44.15 45.15
TraesCS2D01G508300.1 Wheat endoplasmic reticulum, plasma membrane 41.94 45.12
TraesCS7D01G102400.1 Wheat endoplasmic reticulum, plastid, vacuole 43.55 45.0
TraesCS7D01G102800.1 Wheat endoplasmic reticulum, plasma membrane, plastid 40.73 44.99
HORVU2Hr1G112840.1 Barley endoplasmic reticulum, golgi 42.34 44.87
HORVU7Hr1G022720.1 Barley plasma membrane 32.46 44.85
TraesCS7B01G006300.1 Wheat golgi 43.95 44.76
TraesCS7A01G107700.1 Wheat mitochondrion, plastid 44.76 44.67
TraesCS7D01G102000.1 Wheat mitochondrion, plastid 44.76 44.67
TraesCS2B01G535700.1 Wheat endoplasmic reticulum, plasma membrane 41.13 44.54
TraesCS1A01G439000.1 Wheat plasma membrane 44.76 44.4
TraesCS5D01G017000.1 Wheat endoplasmic reticulum, golgi, plastid 42.14 44.28
HORVU5Hr1G122360.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane, plastid 43.95 44.13
Solyc09g065800.2.1 Tomato endoplasmic reticulum, plasma membrane 40.12 44.12
Solyc09g065780.2.1 Tomato endoplasmic reticulum, golgi 38.1 42.76
HORVU7Hr1G030880.1 Barley plasma membrane 42.94 42.69
TraesCS7A01G107900.1 Wheat golgi, mitochondrion 40.93 42.56
HORVU7Hr1G022580.1 Barley golgi, mitochondrion 31.25 42.47
HORVU7Hr1G022780.1 Barley golgi, mitochondrion 40.12 41.98
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016746GO:GO:0016747InterPro:IPR016039UniProt:K4B6K1PFAM:PF08392
PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF5SUPFAM:SSF53901EnsemblPlantsGene:Solyc02g063140.2
EnsemblPlants:Solyc02g063140.2.1TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI0002768652SEG:seg:
Description
3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:K4B6K1]
Coordinates
chr2:+:35212829..35215248
Molecular Weight (calculated)
56139.7 Da
IEP (calculated)
9.306
GRAVY (calculated)
-0.065
Length
496 amino acids
Sequence
(BLAST)
001: MPQVVPNFSN SVKLKYVKLG YQYIVNHILT FLLVPTIIGV TIELLRIGPE DLLNIWNSLH FNALQILSSS FLIISIATVY FMSKPRSIYL VDYSCYKPPV
101: TCRVPFSTFM EHSRLILKDN PKSVEFQMRI LERSGLGEET CLPHSTHYIP PTPTMDAARG EAEEVIFTSI DDLMNKTGLK PKDIDILIVN CSLFSPTPSL
201: SAMVINKYKL RSNIKSYNLS GMGCSAGLIS IDLARDLLQV HPNSYALVIS TEIITPNYYR GSERAMLLPN CLFRMGGAAI LLSNKKRDQY RAKYRLMHVV
301: RTHKGADDKA FKCVFEQEDS QGKVGINLSK DLMVIAGEAL KSNITTIGPL VLPASEQLLF LLTLIGRKIF NPKWKPYIPD FKQAFEHFCI HAGGRAVIDE
401: LQKNLQLSGE HVEASRMTLH RFGNTSSSSL WYEMSYIEAK RRMKRGDRVW QIAFGSGFKC NSAVWKCNRT INTPNDGPWQ DCIDKYPVHI PEIVKL
Best Arabidopsis Sequence Match ( AT1G68530.1 )
(BLAST)
001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL
Arabidopsis Description
CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.