Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- cytosol 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc09g065780.2.1 | Tomato | endoplasmic reticulum, golgi | 77.61 | 79.19 |
VIT_07s0141g00070.t01 | Wine grape | cytosol | 47.67 | 53.75 |
VIT_07s0141g00030.t01 | Wine grape | endoplasmic reticulum, extracellular | 52.11 | 53.05 |
VIT_07s0141g00090.t01 | Wine grape | cytosol | 49.45 | 51.98 |
VIT_07s0141g00060.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 50.78 | 49.14 |
Solyc09g083050.2.1 | Tomato | plasma membrane | 48.56 | 42.69 |
Solyc03g005320.2.1 | Tomato | plasma membrane | 48.12 | 41.81 |
Solyc06g053870.2.1 | Tomato | mitochondrion | 43.9 | 40.74 |
Solyc08g067410.1.1 | Tomato | plasma membrane | 45.45 | 40.59 |
Solyc06g065560.1.1 | Tomato | nucleus | 46.12 | 40.55 |
Solyc12g006820.1.1 | Tomato | plasma membrane | 44.79 | 40.4 |
Solyc02g085870.2.1 | Tomato | plasma membrane | 44.35 | 40.32 |
Solyc02g063140.2.1 | Tomato | golgi | 44.12 | 40.12 |
Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 43.46 | 39.68 |
Solyc05g013220.2.1 | Tomato | endoplasmic reticulum, golgi, plastid | 42.35 | 38.74 |
Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 44.12 | 38.34 |
Solyc06g053900.2.1 | Tomato | cytosol, plasma membrane, plastid | 41.91 | 38.18 |
Solyc10g009240.2.1 | Tomato | peroxisome | 44.35 | 37.81 |
Solyc04g080450.1.1 | Tomato | golgi, peroxisome, plasma membrane | 41.69 | 36.36 |
Solyc08g067260.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 36.36 | 32.41 |
Protein Annotations
KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | UniProt:K4CUK6 | PFAM:PF08392 |
PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 | PANTHER:PTHR31561:SF10 | SUPFAM:SSF53901 | EnsemblPlantsGene:Solyc09g065800.2 |
EnsemblPlants:Solyc09g065800.2.1 | TMHMM:TMhelix | InterPro:Thiolase-like | UniParc:UPI000276C936 | : | : |
Description
3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:K4CUK6]
Coordinates
chr9:-:64070752..64072370
Molecular Weight (calculated)
51196.9 Da
IEP (calculated)
7.429
GRAVY (calculated)
-0.122
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MELLHPSNLF PIFVPSLILV LFWCKIMRRQ RVFLVDFACY RPPKDQQICR QTFIEKSSRS LNSNKNTLEF MDRILQRVGL GEKTYLSKGL LKEPPDMSAK
101: AAKEEVEMAI FGSIDELLLK TGVQCEDIDI LVTVCGVYNI MPSLSSVIVK RYNLRHDIHT YNITGMGCTA GLVALGLVQN LLKVHDNSCA LVVTSDSITE
201: NVYKGNDRSK LLSNCIFRVG AVALLLSNKP SDLNTSKYEL IHTVRSQTSN DDRSYNCIFM EEDVEGHRGI TINKDLLYAA MNTIRLNIST IAPLVLSLSE
301: KLRYLVNLIA QYFHMIKSNV DRPYNPDFSK TVNHFFPHVG GKPVLDDLQK KLGFSDEQME ASRMTLYRFG NTSTCSVWYE VAYVEAKGRV RKGDTLWQIA
401: FGSGFKCTSV IWRANRSIDR DEVNPWSDEI DEFPVDLSQM ETLSDLFVAS K
101: AAKEEVEMAI FGSIDELLLK TGVQCEDIDI LVTVCGVYNI MPSLSSVIVK RYNLRHDIHT YNITGMGCTA GLVALGLVQN LLKVHDNSCA LVVTSDSITE
201: NVYKGNDRSK LLSNCIFRVG AVALLLSNKP SDLNTSKYEL IHTVRSQTSN DDRSYNCIFM EEDVEGHRGI TINKDLLYAA MNTIRLNIST IAPLVLSLSE
301: KLRYLVNLIA QYFHMIKSNV DRPYNPDFSK TVNHFFPHVG GKPVLDDLQK KLGFSDEQME ASRMTLYRFG NTSTCSVWYE VAYVEAKGRV RKGDTLWQIA
401: FGSGFKCTSV IWRANRSIDR DEVNPWSDEI DEFPVDLSQM ETLSDLFVAS K
001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
Arabidopsis Description
KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.